RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 PITX2Q99697 317 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 DOHHQ9BU89 302 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 MROQ9BYG7 248 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 EHD1Q9H4M9 534 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 RUBCNLQ9H714 662 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 ZNF556Q9HAH1 456 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 SIAEQ9HAT2 523 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 PELI2Q9HAT8 420 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 LUZP4Q9P127 313 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 PLEKHB1Q9UF11 243 aaPredicted RBP9.68□□□□□ -0.86
COL5A1-202ENST00000371820 TMEFF2Q9UIK5 374 aaPredicted RBP9.68□□□□□ -0.86
COL5A1-202ENST00000371820 PPT2Q9UMR5 302 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 POFUT2Q9Y2G5 429 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 SAMHD1Q9Y3Z3 626 aaKnown RBP9.68□□□□□ -0.86
COL5A1-202ENST00000371820 SLC22A7Q9Y694 548 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 V9GYQ6 96 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 NOTCH2Q04721 2471 aa9.68□□□□□ -0.86
COL5A1-202ENST00000371820 ESPL1Q14674 2120 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 FEZF1A0PJY2 475 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 FUOMA2VDF0 154 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 SH3D21A4FU49 640 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 NDUFS4O43181 175 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 OR1F1O43749 312 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 FAM20BO75063 409 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 SEMA7AO75326 666 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 ALOX12BO75342 701 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 MT-ND1P03886 318 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 SEMG1P04279 462 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 C8orf89P0DMQ9 161 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 PTPN6P29350 595 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 SERPINB1P30740 379 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 PCGF2P35227 344 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 AHRP35869 848 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 BCL6P41182 706 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 FOXL2P58012 376 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 SELENOWP63302 87 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 E2F2Q14209 437 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 C18orf21Q32NC0 220 aaPredicted RBP9.67□□□□□ -0.86
COL5A1-202ENST00000371820 XKR6Q5GH73 641 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 CRB2Q5IJ48 1285 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 MFSD4BQ5TF39 518 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 UBE2UQ5VVX9 321 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 HIST2H2BCQ6DN03 193 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 FAHD1Q6P587 224 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 GALNT18Q6P9A2 607 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 CCDC80Q76M96 950 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 ABHD13Q7L211 337 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 TMPRSS11BQ86T26 416 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 THOC6Q86W42 341 aaKnown RBP9.67□□□□□ -0.86
COL5A1-202ENST00000371820 SPNS2Q8IVW8 549 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 ZZZ3Q8IYH5 903 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 CENPSQ8N2Z9 138 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 KRTCAP2Q8N6L1 136 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 TTLQ8NG68 377 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 OR9A4Q8NGU2 314 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 ZCCHC10Q8TBK6 192 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 FAR1Q8WVX9 515 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 SLC38A4Q969I6 547 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 MTFMTQ96DP5 389 aaKnown RBP9.67□□□□□ -0.86
COL5A1-202ENST00000371820 YIPF6Q96EC8 236 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 HRASLS5Q96KN8 279 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 TSSK3Q96PN8 268 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 WDR77Q9BQA1 342 aaPredicted RBP9.67□□□□□ -0.86
COL5A1-202ENST00000371820 PSD2Q9BQI7 771 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 EFCAB11Q9BUY7 163 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 GABARAPL3Q9BY60 117 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 MFRPQ9BY79 579 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 TRIM8Q9BZR9 551 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 RIBC2Q9H4K1 309 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 TPT1P8Q9HAU6 139 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 ZNF160Q9HCG1 818 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 FARSBQ9NSD9 589 aaKnown RBP9.67□□□□□ -0.86
COL5A1-202ENST00000371820 RHBDL2Q9NX52 303 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 THUMPD1Q9NXG2 353 aaKnown RBP9.67□□□□□ -0.86
COL5A1-202ENST00000371820 PDP1Q9P0J1 537 aaPredicted RBP9.67□□□□□ -0.86
COL5A1-202ENST00000371820 ATP6V1HQ9UI12 483 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 MKL2Q9ULH7 1088 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 USP22Q9UPT9 525 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 SLC22A14Q9Y267 594 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 FAM32AQ9Y421 112 aaKnown RBP9.67□□□□□ -0.86
COL5A1-202ENST00000371820 DOPEY1Q5JWR5 2465 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 HIVEP3Q5T1R4 2406 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 SEC16AO15027 2179 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 HEATR5BQ9P2D3 2071 aa9.67□□□□□ -0.86
COL5A1-202ENST00000371820 LOC102723996A0A087X1L8 192 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 IGHV1-45A0A0A0MS14 117 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 ARRDC5A6NEK1 342 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 MYO1GB0I1T2 1018 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 LCMT2O60294 686 aaKnown RBP9.66□□□□□ -0.86
COL5A1-202ENST00000371820 SERPIND1P05546 499 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 GSNP06396 782 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 COX6A1P12074 109 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 POLR2IP36954 125 aaKnown RBP9.66□□□□□ -0.86
COL5A1-202ENST00000371820 YAP1P46937 504 aaKnown RBP9.66□□□□□ -0.86
COL5A1-202ENST00000371820 DAPP51397 102 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 PPP5CP53041 499 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 SMIM11AP58511 58 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 COPZ1P61923 177 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 PHC1P78364 1004 aa9.66□□□□□ -0.86
COL5A1-202ENST00000371820 MAT1AQ00266 395 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms