RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 TMEM251Q8N6I4 163 aa13.58□□□□□ -0.24
COL9A1-204ENST00000370496 MIPOL1Q8TD10 442 aa13.58□□□□□ -0.24
COL9A1-204ENST00000370496 GTF2H4Q92759 462 aa13.58□□□□□ -0.24
COL9A1-204ENST00000370496 PLSCR2Q9NRY7 297 aa13.58□□□□□ -0.24
COL9A1-204ENST00000370496 SLC6A13Q9NSD5 602 aa13.58□□□□□ -0.24
COL9A1-204ENST00000370496 EXD2Q9NVH0 621 aa13.58□□□□□ -0.24
COL9A1-204ENST00000370496 FLRT3Q9NZU0 649 aa13.58□□□□□ -0.24
COL9A1-204ENST00000370496 SVILO95425 2214 aa13.57□□□□□ -0.24
COL9A1-204ENST00000370496 NCKAP5O14513 1909 aa13.57□□□□□ -0.24
COL9A1-204ENST00000370496 SNPHO15079 494 aa13.57□□□□□ -0.24
COL9A1-204ENST00000370496 ZCCHC18P0CG32 403 aa13.57□□□□□ -0.24
COL9A1-204ENST00000370496 OR12D1P0DN82 309 aa13.57□□□□□ -0.24
COL9A1-204ENST00000370496 HPGDP15428 266 aa13.57□□□□□ -0.24
COL9A1-204ENST00000370496 RBPJQ06330 500 aa13.57□□□□□ -0.24
COL9A1-204ENST00000370496 TOMM20Q15388 145 aa13.57□□□□□ -0.24
COL9A1-204ENST00000370496 GRAMD1BQ3KR37 738 aa13.57□□□□□ -0.24
COL9A1-204ENST00000370496 GTDC1Q4AE62 458 aa13.57□□□□□ -0.24
COL9A1-204ENST00000370496 KRTCAP3Q53RY4 240 aa13.57□□□□□ -0.24
COL9A1-204ENST00000370496 CMPK2Q5EBM0 449 aa13.57□□□□□ -0.24
COL9A1-204ENST00000370496 OR1J4Q8NGS1 313 aa13.57□□□□□ -0.24
COL9A1-204ENST00000370496 RAB8BQ92930 207 aa13.57□□□□□ -0.24
COL9A1-204ENST00000370496 DTNBP1Q96EV8 351 aa13.57□□□□□ -0.24
COL9A1-204ENST00000370496 AURKBQ96GD4 344 aaPredicted RBP13.57□□□□□ -0.24
COL9A1-204ENST00000370496 ELAC2Q9BQ52 826 aaKnown RBP13.57□□□□□ -0.24
COL9A1-204ENST00000370496 PPP4R1LQ9P1A2 415 aa13.57□□□□□ -0.24
COL9A1-204ENST00000370496 LEF1Q9UJU2 399 aaPredicted RBP13.57□□□□□ -0.24
COL9A1-204ENST00000370496 C15orf41Q9Y2V0 281 aa13.57□□□□□ -0.24
COL9A1-204ENST00000370496 KCNE3Q9Y6H6 103 aa13.57□□□□□ -0.24
COL9A1-204ENST00000370496 NINQ8N4C6 2090 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 A0A1W2PP18 115 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 GMNCA6NCL1 334 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 C2orf72A6NCS6 295 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 SCDO00767 359 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 WISP1O95388 367 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 CBX6O95503 412 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 RFPL3SP0C7P2 107 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 LCN1P31025 176 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 PTGDSP41222 190 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 TXNL4AP83876 142 aaKnown RBP13.56□□□□□ -0.24
COL9A1-204ENST00000370496 HSF1Q00613 529 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 MAPRE2Q15555 327 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 HYAL4Q2M3T9 481 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 FLYWCH1Q4VC44 716 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.56□□□□□ -0.24
COL9A1-204ENST00000370496 ZAR1Q86SH2 424 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 ZNF527Q8NB42 609 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 OR52N2Q8NGI0 321 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 FAM110BQ8TC76 370 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 ZFP90Q8TF47 636 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 XAGE5Q8WWM1 108 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 PAIP1Q9H074 479 aaKnown RBP13.56□□□□□ -0.24
COL9A1-204ENST00000370496 DEFB127Q9H1M4 99 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 EXO5Q9H790 373 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 ZDHHC11Q9H8X9 412 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 TPT1P8Q9HAU6 139 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 SAR1AQ9NR31 198 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 SDHAF3Q9NRP4 125 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 FBXO34Q9NWN3 711 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.56□□□□□ -0.24
COL9A1-204ENST00000370496 NDUFAF1Q9Y375 327 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 CAPN7Q9Y6W3 813 aa13.56□□□□□ -0.24
COL9A1-204ENST00000370496 NBASA2RRP1 2371 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 HMGN4O00479 90 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 FADS1O60427 444 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 OXSR1O95747 527 aaPredicted RBP13.55□□□□□ -0.24
COL9A1-204ENST00000370496 C1QCP02747 245 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 SNRPB2P08579 225 aaKnown RBP13.55□□□□□ -0.24
COL9A1-204ENST00000370496 CELA3AP09093 270 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 ABOP16442 354 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 DRD4P21917 467 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 PTPN6P29350 595 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 DCTP40126 519 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 CRATP43155 626 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 GPAT3Q53EU6 434 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 PAGE3Q5JUK9 113 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 TIGD3Q6B0B8 471 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 DHDDSQ86SQ9 333 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 ZNF614Q8N883 585 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 OR4K17Q8NGC6 315 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 RNF138Q8WVD3 245 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 GNRHR2Q96P88 292 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 PHF12Q96QT6 1004 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 NMUR2Q9GZQ4 415 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 RAD21L1Q9H4I0 556 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 LDAHQ9H6V9 325 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 UBQLN4Q9NRR5 601 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 DKKL1Q9UK85 242 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 PCDHB14Q9Y5E9 798 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 LIPGQ9Y5X9 500 aa13.55□□□□□ -0.24
COL9A1-204ENST00000370496 NPIPA5A0A0B4J1W7 369 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 NPIPA7E9PJI5 369 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 CCDC22O60826 627 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 STX11O75558 287 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 TRAPPC6AO75865 159 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 PDE9AO76083 593 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 NGFRP08138 427 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 NPIPA8P0DM63 369 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 CD1EP15812 388 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 TBXA2RP21731 343 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 MAGEA8P43361 318 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms