RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 PSMD4P55036 377 aaKnown RBP20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 AQP5P55064 265 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 FIGNL1Q6PIW4 674 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 APOOLQ6UXV4 268 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 ACAD11Q709F0 780 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 C6orf120Q7Z4R8 191 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 GLB1L3Q8NCI6 653 aaPredicted RBP20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 VPS37AQ8NEZ2 397 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 OR9I1Q8NGQ6 314 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 GOT1L1Q8NHS2 421 aaPredicted RBP20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 CCDC115Q96NT0 180 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 LDAHQ9H6V9 325 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 SERHLQ9NQF3 203 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 ZIM2Q9NZV7 527 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 BTNL2Q9UIR0 455 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 PCDHGB4Q9UN71 923 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 ABCG2Q9UNQ0 655 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 DOPEY1Q5JWR5 2465 aa20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 USP9YO00507 2555 aaPredicted RBP20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 RNF103-CHMP3A0A140T963 221 aa20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 OR14I1A6ND48 311 aa20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 PRRG2O14669 202 aa20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 POLR3GO15318 223 aaPredicted RBP20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 ZG16O60844 167 aa20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 SLC22A3O75751 556 aa20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 C1QCP02747 245 aa20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 TPOP07202 933 aa20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 MRPL19P49406 292 aaKnown RBP20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 RPS26P62854 115 aaKnown RBP20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 POU6F2P78424 691 aaPredicted RBP20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 GRAMD1BQ3KR37 738 aa20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 CCNJQ5T5M9 372 aa20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 OR5M10Q6IEU7 315 aa20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 C3P1Q6ZMU1 363 aa20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 PLCZ1Q86YW0 608 aa20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 COX18Q8N8Q8 333 aa20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 NEIL3Q8TAT5 605 aa20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 CCDC120Q96HB5 630 aa20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 OR52E6Q96RD3 313 aa20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 INPP5KQ9BT40 448 aa20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 CCDC28BQ9BUN5 200 aa20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 BTBD2Q9BX70 525 aa20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 FBXL2Q9UKC9 423 aa20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 FAF1Q9UNN5 650 aaPredicted RBP20.45■□□□□ 0.86
ECHDC1-203ENST00000368291 SPTAN1Q13813 2472 aaKnown RBP20.44■□□□□ 0.86
ECHDC1-203ENST00000368291 SPTBN1Q01082 2364 aaKnown RBP20.44■□□□□ 0.86
ECHDC1-203ENST00000368291 SCO2O43819 266 aa20.44■□□□□ 0.86
ECHDC1-203ENST00000368291 UQCRC2P22695 453 aa20.44■□□□□ 0.86
ECHDC1-203ENST00000368291 CASP6P55212 293 aa20.44■□□□□ 0.86
ECHDC1-203ENST00000368291 GXYLT1Q4G148 440 aa20.44■□□□□ 0.86
ECHDC1-203ENST00000368291 NCCRP1Q6ZVX7 275 aaPredicted RBP20.44■□□□□ 0.86
ECHDC1-203ENST00000368291 FAM83FQ8NEG4 500 aaPredicted RBP20.44■□□□□ 0.86
ECHDC1-203ENST00000368291 OR5D16Q8NGK9 328 aa20.44■□□□□ 0.86
ECHDC1-203ENST00000368291 OR4C3Q8NH37 302 aa20.44■□□□□ 0.86
ECHDC1-203ENST00000368291 ADAMTS15Q8TE58 950 aa20.44■□□□□ 0.86
ECHDC1-203ENST00000368291 THOC1Q96FV9 657 aaKnown RBP20.44■□□□□ 0.86
ECHDC1-203ENST00000368291 OR7D2Q96RA2 312 aa20.44■□□□□ 0.86
ECHDC1-203ENST00000368291 DMRTA2Q96SC8 542 aa20.44■□□□□ 0.86
ECHDC1-203ENST00000368291 ZBTB18Q99592 522 aa20.44■□□□□ 0.86
ECHDC1-203ENST00000368291 MEMO1Q9Y316 297 aa20.44■□□□□ 0.86
ECHDC1-203ENST00000368291 ATP8B1O43520 1251 aa20.43■□□□□ 0.86
ECHDC1-203ENST00000368291 CBR3O75828 277 aa20.43■□□□□ 0.86
ECHDC1-203ENST00000368291 TRAPPC6AO75865 159 aa20.43■□□□□ 0.86
ECHDC1-203ENST00000368291 MATN1P21941 496 aa20.43■□□□□ 0.86
ECHDC1-203ENST00000368291 CDKN2CP42773 168 aa20.43■□□□□ 0.86
ECHDC1-203ENST00000368291 PER3P56645 1201 aa20.43■□□□□ 0.86
ECHDC1-203ENST00000368291 ADORA2A-AS1P86434 159 aa20.43■□□□□ 0.86
ECHDC1-203ENST00000368291 EIPR1Q53HC9 387 aa20.43■□□□□ 0.86
ECHDC1-203ENST00000368291 SAXO2Q658L1 398 aa20.43■□□□□ 0.86
ECHDC1-203ENST00000368291 BHLHB9Q6PI77 547 aa20.43■□□□□ 0.86
ECHDC1-203ENST00000368291 MARCH3Q86UD3 253 aa20.43■□□□□ 0.86
ECHDC1-203ENST00000368291 MIER2Q8N344 545 aa20.43■□□□□ 0.86
ECHDC1-203ENST00000368291 RFWD2Q8NHY2 731 aa20.43■□□□□ 0.86
ECHDC1-203ENST00000368291 CHMP6Q96FZ7 201 aa20.43■□□□□ 0.86
ECHDC1-203ENST00000368291 MED4Q9NPJ6 270 aa20.43■□□□□ 0.86
ECHDC1-203ENST00000368291 PNPLA3Q9NST1 481 aa20.43■□□□□ 0.86
ECHDC1-203ENST00000368291 BCKDKO14874 412 aa20.42■□□□□ 0.86
ECHDC1-203ENST00000368291 IL6P05231 212 aa20.42■□□□□ 0.86
ECHDC1-203ENST00000368291 NGFRP08138 427 aa20.42■□□□□ 0.86
ECHDC1-203ENST00000368291 KRT16P08779 473 aa20.42■□□□□ 0.86
ECHDC1-203ENST00000368291 WIPI1Q5MNZ9 446 aaPredicted RBP20.42■□□□□ 0.86
ECHDC1-203ENST00000368291 YRDCQ86U90 279 aaKnown RBP20.42■□□□□ 0.86
ECHDC1-203ENST00000368291 FADS6Q8N9I5 356 aa20.42■□□□□ 0.86
ECHDC1-203ENST00000368291 OR5M9Q8NGP3 310 aa20.42■□□□□ 0.86
ECHDC1-203ENST00000368291 MIPOL1Q8TD10 442 aa20.42■□□□□ 0.86
ECHDC1-203ENST00000368291 STON2Q8WXE9 905 aa20.42■□□□□ 0.86
ECHDC1-203ENST00000368291 SLC35G5Q96KT7 338 aa20.42■□□□□ 0.86
ECHDC1-203ENST00000368291 EXO5Q9H790 373 aa20.42■□□□□ 0.86
ECHDC1-203ENST00000368291 ASH1LQ9NR48 2969 aaKnown RBP20.42■□□□□ 0.86
ECHDC1-203ENST00000368291 SLC6A5Q9Y345 797 aa20.42■□□□□ 0.86
ECHDC1-203ENST00000368291 E9PLN8 166 aa20.41■□□□□ 0.86
ECHDC1-203ENST00000368291 OXSR1O95747 527 aaPredicted RBP20.41■□□□□ 0.86
ECHDC1-203ENST00000368291 TBXA2RP21731 343 aa20.41■□□□□ 0.86
ECHDC1-203ENST00000368291 LCN1P31025 176 aa20.41■□□□□ 0.86
ECHDC1-203ENST00000368291 POLR2JP52435 117 aaKnown RBP20.41■□□□□ 0.86
ECHDC1-203ENST00000368291 CASP9P55211 416 aa20.41■□□□□ 0.86
ECHDC1-203ENST00000368291 TOMM20Q15388 145 aa20.41■□□□□ 0.86
ECHDC1-203ENST00000368291 HSP90B2PQ58FF3 399 aa20.41■□□□□ 0.86
ECHDC1-203ENST00000368291 DCST2Q5T1A1 773 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms