RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 PRKYO43930 277 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 MMP20O60882 483 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 RNGTTO60942 597 aaKnown RBP10.8□□□□□ -0.68
USF1-201ENST00000368019 ZNF780AO75290 641 aaPredicted RBP10.8□□□□□ -0.68
USF1-201ENST00000368019 CTSLP07711 333 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 TSPAN19P0C672 248 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 ACP2P11117 423 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 MYL12AP19105 171 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 ALAS2P22557 587 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 MAT2AP31153 395 aaKnown RBP10.8□□□□□ -0.68
USF1-201ENST00000368019 GABRA5P31644 462 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 SOX3P41225 446 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 KIR2DL3P43628 341 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 GAS1P54826 345 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 LIM2P55344 173 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 CDK5Q00535 292 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 INSM1Q01101 510 aaPredicted RBP10.8□□□□□ -0.68
USF1-201ENST00000368019 DMPKQ09013 629 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 DSG2Q14126 1118 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 GPR19Q15760 415 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 MINDY4Q4G0A6 757 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 SYTL3Q4VX76 610 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 ENTPD8Q5MY95 495 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 HENMT1Q5T8I9 393 aaKnown RBP10.8□□□□□ -0.68
USF1-201ENST00000368019 PIP5KL1Q5T9C9 394 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 PRAMEF8Q5VWM4 474 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 PRAMEF7Q5VXH5 474 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 TRIQKQ629K1 86 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 ZNF782Q6ZMW2 699 aaPredicted RBP10.8□□□□□ -0.68
USF1-201ENST00000368019 Q6ZVU0 165 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 TMPRSS11BQ86T26 416 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 NRSN1Q8IZ57 195 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 VANGL1Q8TAA9 524 aaPredicted RBP10.8□□□□□ -0.68
USF1-201ENST00000368019 ACOT12Q8WYK0 555 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 UFD1Q92890 307 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 TRMT61AQ96FX7 289 aaKnown RBP10.8□□□□□ -0.68
USF1-201ENST00000368019 UBL7Q96S82 380 aaPredicted RBP10.8□□□□□ -0.68
USF1-201ENST00000368019 ZNF607Q96SK3 696 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 MARVELD1Q9BSK0 173 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 PITHD1Q9GZP4 211 aaPredicted RBP10.8□□□□□ -0.68
USF1-201ENST00000368019 PPP1R3EQ9H7J1 279 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 RANGRFQ9HD47 186 aaPredicted RBP10.8□□□□□ -0.68
USF1-201ENST00000368019 PRDM8Q9NQV8 689 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 ASH1LQ9NR48 2969 aaKnown RBP10.8□□□□□ -0.68
USF1-201ENST00000368019 ING3Q9NXR8 418 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 B3GNT2Q9NY97 397 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 DNAJC27Q9NZQ0 273 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 NUFIP1Q9UHK0 495 aaKnown RBP10.8□□□□□ -0.68
USF1-201ENST00000368019 CA5BQ9Y2D0 317 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 CARD8Q9Y2G2 431 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 RNF215Q9Y6U7 377 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 RP1P56715 2156 aa10.8□□□□□ -0.68
USF1-201ENST00000368019 COL6A6A6NMZ7 2263 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 C1QTNF3-AMACRE9PGA6 284 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 CHST10O43529 356 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 SIGLEC6O43699 453 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 ORC5O43913 435 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 OR10H3O60404 316 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 SLC19A2O60779 497 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 C1orf105O95561 183 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 GIMD1P0DJR0 217 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 GKP32189 559 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 GPC1P35052 558 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 SMSP52788 366 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 P2RX3P56373 397 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 BDH1Q02338 343 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 HNRNPA0Q13151 305 aaKnown RBP10.79□□□□□ -0.68
USF1-201ENST00000368019 MAB21L1Q13394 359 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 EFR3AQ14156 821 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 DOC2BQ14184 412 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 SLBPQ14493 270 aaKnown RBP eCLIP10.79□□□□□ -0.68
USF1-201ENST00000368019 GANABQ14697 944 aaKnown RBP10.79□□□□□ -0.68
USF1-201ENST00000368019 ZNF284Q2VY69 593 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 POM121L1PQ3SYA9 428 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 ZNF658BQ4V348 819 aaPredicted RBP10.79□□□□□ -0.68
USF1-201ENST00000368019 HSD17B12Q53GQ0 312 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 ZMAT1Q5H9K5 638 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 BICRALQ6AI39 1079 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 TCTN3Q6NUS6 607 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 C1orf94Q6P1W5 598 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 LCTLQ6UWM7 567 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 GDPD4Q6W3E5 623 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 CDH24Q86UP0 819 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 TCEANCQ8N8B7 351 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 C19orf18Q8NEA5 215 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 TMIEQ8NEW7 156 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 GPR156Q8NFN8 814 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 GPR32P1Q8NGA4 272 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 OR4K1Q8NGD4 311 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 OR2A12Q8NGT7 310 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 KLHDC7BQ96G42 594 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 HYLS1Q96M11 299 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 QRFPRQ96P65 431 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 IL4I1Q96RQ9 567 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 KCNJ15Q99712 375 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 SPATA5L1Q9BVQ7 753 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 ANKRD19PQ9H560 264 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 TIGARQ9NQ88 270 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 ASB6Q9NWX5 421 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 TAS2R7Q9NYW3 318 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms