RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 CASTOR1Q8WTX7 329 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 TREX2Q9BQ50 279 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 CRB3Q9BUF7 120 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 GABARAPL3Q9BY60 117 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 OR51V1Q9H2C8 321 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 SCP2D1Q9UJQ7 156 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 NDRG4Q9ULP0 352 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 SPAG17Q6Q759 2223 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 PSME4Q14997 1843 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 TEX13CA0A0J9YWL9 993 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 LYRM1O43325 122 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 RGS9O75916 674 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 PNPP00491 289 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 OR12D1P0DN82 309 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 PRKAR1BP31321 381 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 GNALP38405 381 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 FPGSQ05932 587 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 POU4F2Q12837 409 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 HENMT1Q5T8I9 393 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 HACD4Q5VWC8 232 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 FAM83HQ6ZRV2 1179 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 HS3ST5Q8IZT8 346 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 OR2A12Q8NGT7 310 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 HAVCR2Q8TDQ0 301 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 ELMOD3Q96FG2 381 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 NDC1Q9BTX1 674 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.07□□□□□ -1.62e-10■■□□□ 11.6
CDC42BPA-204ENST00000366767 OR10A4Q9H209 315 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 MTHFD2LQ9H903 347 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 A4GALTQ9NPC4 353 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 MED31Q9Y3C7 131 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 ICE1Q9Y2F5 2266 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 SLC5A10A0PJK1 596 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 ANHXE9PGG2 379 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 H3BNC9 293 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 PRAMEF2O60811 474 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 LILRB3O75022 631 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 ITGBL1O95965 494 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 ALDOBP05062 364 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 TACSTD2P09758 323 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 FURINP09958 794 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 HLA-EP13747 358 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 PCSK6P29122 969 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 IMPA1P29218 277 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 EIF2DP41214 584 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 SPCS2Q15005 226 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 ARL9Q6T311 187 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZNF705AQ6ZN79 300 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 WDR20Q8TBZ3 569 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZNF223Q9UK11 482 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 USP22Q9UPT9 525 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 NUBP2Q9Y5Y2 271 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 DIDO1Q9BTC0 2240 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 SLC34A2O95436 690 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 IFNA1P01562 189 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 RAB3AP20336 220 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 RAB4AP20338 218 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 TACR1P25103 407 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 MAGEB1P43366 347 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 CAMLGP49069 296 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 GRIN2CQ14957 1233 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 TMEM52BQ4KMG9 183 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 CATSPEREQ5SY80 951 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 TIGD3Q6B0B8 471 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 KIAA1211LQ6NV74 962 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 SMARCD3Q6STE5 483 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 Q6ZNB5 142 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 SLC46A3Q7Z3Q1 461 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 IQCHQ86VS3 1027 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 DNAJC22Q8N4W6 341 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 OR10H5Q8NGA6 315 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZNF480Q8WV37 535 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 RIPOR3Q96MK2 946 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 FBXO10Q9UK96 956 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 POU2F3Q9UKI9 436 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 HSBP1L1C9JCN9 74 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 TIMP1P01033 207 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 IL1AP01583 271 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 TFP02787 698 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 GTF2F2P13984 249 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 RAB28P51157 221 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 WDR5P61964 334 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 SAMD12Q8N8I0 201 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 OR2T33Q8NG76 320 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZDHHC1Q8WTX9 485 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 LINC01599Q8WXQ3 324 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 F2RL3Q96RI0 385 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 DPH2Q9BQC3 489 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 SULT4A1Q9BR01 284 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 AMBRA1Q9C0C7 1298 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 OR2S2Q9NQN1 319 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 FBXO8Q9NRD0 319 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 TRIP12Q14669 1992 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 HSPA12AO43301 675 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 TNFP01375 233 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 MBP02144 154 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 SLC6A6P31641 620 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 GRK6P43250 576 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 BLKP51451 505 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms