RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 DEFB127Q9H1M4 99 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 KLHL31Q9H511 634 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 LIN28AQ9H9Z2 209 aaKnown RBP4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 KCNK9Q9NPC2 374 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 PNO1Q9NRX1 252 aaKnown RBP4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 HOMER3Q9NSC5 361 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 TMEM45AQ9NWC5 275 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 TAS2R13Q9NYV9 303 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 HEY2Q9UBP5 337 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 FBXW2Q9UKT8 454 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 IKZF3Q9UKT9 509 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 NFU1Q9UMS0 254 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 KLF13Q9Y2Y9 288 aaPredicted RBP4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 DTNAQ9Y4J8 743 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 ZNF407Q9C0G0 2248 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 HIVEP1P15822 2718 aa4.78□□□□□ -1.64
RNU4-4P-201ENST00000364588 ANKRD17O75179 2603 aaKnown RBP4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 DNAJC13O75165 2243 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 IGKV3D-11A0A0A0MRZ8 115 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 A0A0G2JMM0 328 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 A0A1W2PPB8 328 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 A0A1W2PRS3 328 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 SLC22A23A1A5C7 686 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 PINLYPA6NC86 204 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 USP27XA6NNY8 438 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 FAM166BA8MTA8 275 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 KIR3DP1A8MWS1 328 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 NPIPA2E9PIF3 369 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 NPIPA3F8WFD2 350 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 G3V3Y1 287 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 KLRC4-KLRK1H3BQV0 150 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 J3KTA2 159 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 KCNAB3O43448 404 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 PRKNO60260 465 aaPredicted RBP4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 CCDC175P0C221 793 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 RNH1P13489 461 aaKnown RBP4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 PGAM1P18669 254 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 SAT1P21673 171 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 CHRNB4P30926 498 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 IDUAP35475 653 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 AHRP35869 848 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 MAGEA3P43357 314 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 HSPA7P48741 367 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 ART1P52961 327 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 NUP107P57740 925 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 BTN3A2P78410 334 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 REEP5Q00765 189 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 PLGLB1Q02325 96 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 PMPCAQ10713 525 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 CRYMQ14894 314 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 MPEG1Q2M385 716 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 CCDC137Q6PK04 289 aaKnown RBP4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 SPNS3Q6ZMD2 512 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 TMEM200AQ86VY9 491 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 THOC6Q86W42 341 aaKnown RBP4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 LAS2Q8IYD9 372 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 CA13Q8N1Q1 262 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 TBC1D19Q8N5T2 526 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 GPATCH11Q8N954 259 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 NAT8LQ8N9F0 302 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 ZFP62Q8NB50 900 aaPredicted RBP4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 POGLUT1Q8NBL1 392 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 ACBD4Q8NC06 268 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 APCDD1LQ8NCL9 501 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 ADPRHL1Q8NDY3 354 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 B3GNT7Q8NFL0 401 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 TRIM58Q8NG06 486 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 ASB5Q8WWX0 329 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 SLC5A11Q8WWX8 675 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 CCT6BQ92526 530 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 RND1Q92730 232 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 NCLNQ969V3 563 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 FBXL8Q96CD0 374 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 TREX2Q9BQ50 279 aaPredicted RBP4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 AIF1LQ9BQI0 150 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 AICDAQ9GZX7 198 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 TP63Q9H3D4 680 aaPredicted RBP4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 TRIM45Q9H8W5 580 aaPredicted RBP4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 PPANQ9NQ55 473 aaKnown RBP4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 DEPPQ9NTK1 212 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 ZNF223Q9UK11 482 aaPredicted RBP4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 ERVK-11Q9UQG0 969 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 RNF6Q9Y252 685 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 CCDC168Q8NDH2 2452 aa4.77□□□□□ -1.65
RNU4-4P-201ENST00000364588 NCKAP5O14513 1909 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 URADA6NGE7 173 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 WWP2O00308 870 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 CDC7O00311 574 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 DHHO43323 396 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 ERI3O43414 337 aaKnown RBP4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 OR2J2O76002 312 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 TOXO94900 526 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 OR6B1O95007 311 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 NADKO95544 446 aaPredicted RBP4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 ENO1P06733 434 aaKnown RBP4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 SERPINA6P08185 405 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 ITGA5P08648 1049 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 SMIM10L1P0DMW3 83 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 IGFBP2P18065 325 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 HNRNPH1P31943 449 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms