RNA–Protein interactions for RNA: ENST00000362588.1

RNU4-35P-201, Transcript of RNA, U4 small nuclear 35, pseudogene, humanhuman

BASIC

Gene RNU4-35P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-35P-201ENST00000362588 PNLIPRP2P54317 469 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 GAS1P54826 345 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 CLDN8P56748 225 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 UFM1P61960 85 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 DCAF7P61962 342 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 HBA1P69905 142 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 RPP38P78345 283 aaKnown RBP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 POU6F2P78424 691 aaPredicted RBP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 MRPS22P82650 360 aaKnown RBP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 OCRLQ01968 901 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 EMX2Q04743 252 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 SF3A3Q12874 501 aaKnown RBP eCLIP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 EFR3AQ14156 821 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 ZNHIT3Q15649 155 aaPredicted RBP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 CD226Q15762 336 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 DECR1Q16698 335 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 SPDYE7PQ495Y7 208 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 GTDC1Q4AE62 458 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 ACSF3Q4G176 576 aaPredicted RBP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 SPANXN4Q5MJ08 99 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 TBCELQ5QJ74 424 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 WLSQ5T9L3 541 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 AGBL2Q5U5Z8 902 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 SP5Q6BEB4 398 aaPredicted RBP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 NXNQ6DKJ4 435 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 VASNQ6EMK4 673 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 MFSD12Q6NUT3 480 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 SLC30A6Q6NXT4 461 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 TNFAIP8L2Q6P589 184 aaPredicted RBP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 TMEM81Q6P7N7 255 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 PAOXQ6QHF9 649 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 ARSKQ6UWY0 536 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 B3GNT6Q6ZMB0 384 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 BNC2Q6ZN30 1099 aaPredicted RBP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 RGS9BPQ6ZS82 235 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 NUP54Q7Z3B4 507 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 R3HCC1LQ7Z5L2 792 aaKnown RBP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 PACS2Q86VP3 889 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 PLCZ1Q86YW0 608 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 LIX1LQ8IVB5 337 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 WDR75Q8IWA0 830 aaKnown RBP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 ULK2Q8IYT8 1036 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 UBQLNLQ8IYU4 475 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 DND1Q8IYX4 353 aaKnown RBP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 SAMD14Q8IZD0 417 aaPredicted RBP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 ZNF614Q8N883 585 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 COX18Q8N8Q8 333 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 RELL2Q8NC24 303 aaPredicted RBP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 C7orf57Q8NEG2 295 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 TNIP2Q8NFZ5 429 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 OR2M3Q8NG83 312 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 OR4K17Q8NGC6 315 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 OR9I1Q8NGQ6 314 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 OR14L1PQ8NHC6 308 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 ZFP28Q8NHY6 868 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 PNPT1Q8TCS8 783 aaKnown RBP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 DUSP19Q8WTR2 217 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 PHF10Q8WUB8 498 aaKnown RBP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 RNF138Q8WVD3 245 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 SMPDL3BQ92485 455 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 RAB8BQ92930 207 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 ABTB1Q969K4 478 aaPredicted RBP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 MARVELD3Q96A59 401 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 SARAFQ96BY9 339 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 TMCO6Q96DC7 493 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 WDYHV1Q96HA8 205 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 SH3YL1Q96HL8 342 aaPredicted RBP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 METTL2AQ96IZ6 378 aaKnown RBP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 SLC35G5Q96KT7 338 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 ATP6V1G3Q96LB4 118 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 SFXN2Q96NB2 322 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 MS4A4EQ96PG1 132 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 OR7D2Q96RA2 312 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 OR52B2Q96RD2 323 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 TRIB1Q96RU8 372 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 SECISBP2Q96T21 854 aaKnown RBP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 TIMP4Q99727 224 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 VKORC1Q9BQB6 163 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 TUBA1CQ9BQE3 449 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 TTYH2Q9BSA4 534 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 INPP5KQ9BT40 448 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 LMF2Q9BU23 707 aaKnown RBP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 DPY30Q9C005 99 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 OR2B2Q9GZK3 357 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 STMN4Q9H169 189 aaPredicted RBP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 TP63Q9H3D4 680 aaPredicted RBP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 TMEM185BQ9H7F4 350 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 MANSC1Q9H8J5 431 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 MEAF6Q9HAF1 191 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 Q9N2J8 555 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 NPDC1Q9NQX5 325 aaPredicted RBP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 SLC6A13Q9NSD5 602 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 ACSS1Q9NUB1 689 aaPredicted RBP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 GPATCH2Q9NW75 528 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 NKIRAS1Q9NYS0 192 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 NOP53Q9NZM5 478 aaKnown RBP3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 B4GALT7Q9UBV7 327 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 HAO1Q9UJM8 370 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 DKKL1Q9UK85 242 aa3.16□□□□□ -1.9
RNU4-35P-201ENST00000362588 EIF3LQ9Y262 564 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms