RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 LIPCP11150 499 aa16.67■□□□□ 0.26
CCDC7-203ENST00000362006 IL7RP16871 459 aa16.67■□□□□ 0.26
CCDC7-203ENST00000362006 RPS4Y1P22090 263 aaKnown RBP16.67■□□□□ 0.26
CCDC7-203ENST00000362006 GCKP35557 465 aa16.67■□□□□ 0.26
CCDC7-203ENST00000362006 KRT20P35900 424 aa16.67■□□□□ 0.26
CCDC7-203ENST00000362006 NR0B1P51843 470 aaKnown RBP16.67■□□□□ 0.26
CCDC7-203ENST00000362006 BTBD16Q32M84 506 aa16.67■□□□□ 0.26
CCDC7-203ENST00000362006 OLIG3Q7RTU3 272 aa16.67■□□□□ 0.26
CCDC7-203ENST00000362006 TAGAPQ8N103 731 aa16.67■□□□□ 0.26
CCDC7-203ENST00000362006 SLC34A3Q8N130 599 aa16.67■□□□□ 0.26
CCDC7-203ENST00000362006 OR10Q1Q8NGQ4 319 aa16.67■□□□□ 0.26
CCDC7-203ENST00000362006 LRTOMTQ8WZ04 291 aa16.67■□□□□ 0.26
CCDC7-203ENST00000362006 PKP2Q99959 881 aa16.67■□□□□ 0.26
CCDC7-203ENST00000362006 BDH2Q9BUT1 245 aa16.67■□□□□ 0.26
CCDC7-203ENST00000362006 DEFB126Q9BYW3 111 aa16.67■□□□□ 0.26
CCDC7-203ENST00000362006 AGPAT4Q9NRZ5 378 aa16.67■□□□□ 0.26
CCDC7-203ENST00000362006 KLHL28Q9NXS3 571 aa16.67■□□□□ 0.26
CCDC7-203ENST00000362006 RIMS3Q9UJD0 308 aa16.67■□□□□ 0.26
CCDC7-203ENST00000362006 SLC13A4Q9UKG4 626 aa16.67■□□□□ 0.26
CCDC7-203ENST00000362006 AK5Q9Y6K8 562 aa16.67■□□□□ 0.26
CCDC7-203ENST00000362006 TPST1O60507 370 aa16.66■□□□□ 0.26
CCDC7-203ENST00000362006 HPP00738 406 aa16.66■□□□□ 0.26
CCDC7-203ENST00000362006 LDLRP01130 860 aa16.66■□□□□ 0.26
CCDC7-203ENST00000362006 ATP6AP1Q15904 470 aa16.66■□□□□ 0.26
CCDC7-203ENST00000362006 NNATQ16517 81 aa16.66■□□□□ 0.26
CCDC7-203ENST00000362006 LIN52Q52LA3 116 aa16.66■□□□□ 0.26
CCDC7-203ENST00000362006 EIPR1Q53HC9 387 aa16.66■□□□□ 0.26
CCDC7-203ENST00000362006 LILRA2Q8N149 483 aa16.66■□□□□ 0.26
CCDC7-203ENST00000362006 NXPE2Q96DL1 559 aa16.66■□□□□ 0.26
CCDC7-203ENST00000362006 CENPNQ96H22 339 aaPredicted RBP16.66■□□□□ 0.26
CCDC7-203ENST00000362006 C7orf34Q96L11 122 aa16.66■□□□□ 0.26
CCDC7-203ENST00000362006 FBXO34Q9NWN3 711 aa16.66■□□□□ 0.26
CCDC7-203ENST00000362006 DNAJB9Q9UBS3 223 aa16.66■□□□□ 0.26
CCDC7-203ENST00000362006 SLC9A8Q9Y2E8 581 aa16.66■□□□□ 0.26
CCDC7-203ENST00000362006 AHCTF1Q8WYP5 2266 aa16.66■□□□□ 0.26
CCDC7-203ENST00000362006 CLOCKO15516 846 aa16.66■□□□□ 0.26
CCDC7-203ENST00000362006 IGKV1D-16P01601 117 aa16.66■□□□□ 0.26
CCDC7-203ENST00000362006 F8A1P23610 371 aa16.66■□□□□ 0.26
CCDC7-203ENST00000362006 ATP12AP54707 1039 aa16.66■□□□□ 0.26
CCDC7-203ENST00000362006 TMEM102Q8N9M5 508 aaPredicted RBP16.66■□□□□ 0.26
CCDC7-203ENST00000362006 GPR32P1Q8NGA4 272 aa16.66■□□□□ 0.26
CCDC7-203ENST00000362006 DIO2Q92813 273 aa16.66■□□□□ 0.26
CCDC7-203ENST00000362006 ZG16BQ96DA0 208 aa16.66■□□□□ 0.26
CCDC7-203ENST00000362006 ZNF347Q96SE7 839 aa16.66■□□□□ 0.26
CCDC7-203ENST00000362006 GPN2Q9H9Y4 310 aaPredicted RBP16.66■□□□□ 0.26
CCDC7-203ENST00000362006 ZNF443Q9Y2A4 671 aaPredicted RBP16.66■□□□□ 0.26
CCDC7-203ENST00000362006 SH3GLB1Q9Y371 365 aa16.66■□□□□ 0.26
CCDC7-203ENST00000362006 PEX12O00623 359 aa16.65■□□□□ 0.26
CCDC7-203ENST00000362006 CASQ2O14958 399 aaPredicted RBP16.65■□□□□ 0.26
CCDC7-203ENST00000362006 LGI1O95970 557 aa16.65■□□□□ 0.26
CCDC7-203ENST00000362006 CST1P01037 141 aa16.65■□□□□ 0.26
CCDC7-203ENST00000362006 IFNW1P05000 195 aa16.65■□□□□ 0.26
CCDC7-203ENST00000362006 RFX3P48380 749 aa16.65■□□□□ 0.26
CCDC7-203ENST00000362006 SESN3P58005 492 aa16.65■□□□□ 0.26
CCDC7-203ENST00000362006 ZNF141Q15928 474 aa16.65■□□□□ 0.26
CCDC7-203ENST00000362006 QRSL1Q9H0R6 528 aaKnown RBP16.65■□□□□ 0.26
CCDC7-203ENST00000362006 DPM1O60762 260 aa16.64■□□□□ 0.25
CCDC7-203ENST00000362006 UGT2B17O75795 530 aa16.64■□□□□ 0.25
CCDC7-203ENST00000362006 NID1P14543 1247 aa16.64■□□□□ 0.25
CCDC7-203ENST00000362006 NAGAP17050 411 aa16.64■□□□□ 0.25
CCDC7-203ENST00000362006 PNLIPRP2P54317 469 aa16.64■□□□□ 0.25
CCDC7-203ENST00000362006 PLCXD2Q0VAA5 305 aa16.64■□□□□ 0.25
CCDC7-203ENST00000362006 VRK2Q86Y07 508 aa16.64■□□□□ 0.25
CCDC7-203ENST00000362006 SLC15A4Q8N697 577 aa16.64■□□□□ 0.25
CCDC7-203ENST00000362006 TMBIM1Q969X1 311 aa16.64■□□□□ 0.25
CCDC7-203ENST00000362006 VCX3BQ9H321 246 aa16.64■□□□□ 0.25
CCDC7-203ENST00000362006 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.64■□□□□ 0.25
CCDC7-203ENST00000362006 NPIPB9F8W1W9 429 aa16.64■□□□□ 0.25
CCDC7-203ENST00000362006 HS6ST1O60243 411 aa16.64■□□□□ 0.25
CCDC7-203ENST00000362006 ABCB7O75027 752 aa16.64■□□□□ 0.25
CCDC7-203ENST00000362006 REM1O75628 298 aa16.64■□□□□ 0.25
CCDC7-203ENST00000362006 IL12BP29460 328 aa16.64■□□□□ 0.25
CCDC7-203ENST00000362006 DCTP40126 519 aa16.64■□□□□ 0.25
CCDC7-203ENST00000362006 VLDLRP98155 873 aa16.64■□□□□ 0.25
CCDC7-203ENST00000362006 RNF220Q5VTB9 566 aa16.64■□□□□ 0.25
CCDC7-203ENST00000362006 CMIPQ8IY22 773 aa16.64■□□□□ 0.25
CCDC7-203ENST00000362006 ZNF527Q8NB42 609 aa16.64■□□□□ 0.25
CCDC7-203ENST00000362006 CATSPER1Q8NEC5 780 aa16.64■□□□□ 0.25
CCDC7-203ENST00000362006 APOBEC4Q8WW27 367 aaKnown RBP16.64■□□□□ 0.25
CCDC7-203ENST00000362006 ZNF160Q9HCG1 818 aa16.64■□□□□ 0.25
CCDC7-203ENST00000362006 UBQLN4Q9NRR5 601 aa16.64■□□□□ 0.25
CCDC7-203ENST00000362006 P4HTMQ9NXG6 502 aa16.64■□□□□ 0.25
CCDC7-203ENST00000362006 FAM32AQ9Y421 112 aaKnown RBP16.64■□□□□ 0.25
CCDC7-203ENST00000362006 GNGT2O14610 69 aa16.63■□□□□ 0.25
CCDC7-203ENST00000362006 PRKNO60260 465 aaPredicted RBP16.63■□□□□ 0.25
CCDC7-203ENST00000362006 MT-ND1P03886 318 aa16.63■□□□□ 0.25
CCDC7-203ENST00000362006 ABCD3P28288 659 aa16.63■□□□□ 0.25
CCDC7-203ENST00000362006 PTDSS1P48651 473 aaKnown RBP16.63■□□□□ 0.25
CCDC7-203ENST00000362006 HMBOX1Q6NT76 420 aa16.63■□□□□ 0.25
CCDC7-203ENST00000362006 AMIGO2Q86SJ2 522 aa16.63■□□□□ 0.25
CCDC7-203ENST00000362006 MRGPREQ86SM8 312 aa16.63■□□□□ 0.25
CCDC7-203ENST00000362006 CARM1Q86X55 608 aa16.63■□□□□ 0.25
CCDC7-203ENST00000362006 KBTBD2Q8IY47 623 aa16.63■□□□□ 0.25
CCDC7-203ENST00000362006 SLC22A8Q8TCC7 542 aa16.63■□□□□ 0.25
CCDC7-203ENST00000362006 OMA1Q96E52 524 aa16.63■□□□□ 0.25
CCDC7-203ENST00000362006 MYOTQ9UBF9 498 aa16.63■□□□□ 0.25
CCDC7-203ENST00000362006 FBXL4Q9UKA2 621 aa16.63■□□□□ 0.25
CCDC7-203ENST00000362006 NPFFR2Q9Y5X5 522 aa16.63■□□□□ 0.25
CCDC7-203ENST00000362006 ENPP4Q9Y6X5 453 aa16.63■□□□□ 0.25
CCDC7-203ENST00000362006 NINQ8N4C6 2090 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms