RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 CKMT1AP12532 417 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 TYRP1P17643 537 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 RPS19P39019 145 aaKnown RBP21.09■□□□□ 0.97
LDB1-201ENST00000361198 AVPR1BP47901 424 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 HOXC5Q00444 222 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 DUSP5Q16690 384 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 LRIT3Q3SXY7 679 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 SLC25A30Q5SVS4 291 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 MEX3DQ86XN8 651 aaKnown RBP21.09■□□□□ 0.97
LDB1-201ENST00000361198 SLC34A3Q8N130 599 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 LINC00471Q8N535 108 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 KCNS3Q9BQ31 491 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 A0A1W2PPC4 97 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 FGF17O60258 216 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 CYP7B1O75881 506 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 HBQ1P09105 142 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 PSMA1P25786 263 aaKnown RBP21.09■□□□□ 0.97
LDB1-201ENST00000361198 TRHRP34981 398 aaPredicted RBP21.09■□□□□ 0.97
LDB1-201ENST00000361198 HOXD12P35452 270 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 SOX3P41225 446 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 VSX2P58304 361 aaPredicted RBP21.09■□□□□ 0.97
LDB1-201ENST00000361198 ZNF628Q5EBL2 1059 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 BCDIN3DQ7Z5W3 292 aaKnown RBP21.09■□□□□ 0.97
LDB1-201ENST00000361198 FAM26EQ8N5C1 309 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 CSNK1A1LQ8N752 337 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 TCEANCQ8N8B7 351 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 ORAI3Q9BRQ5 295 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 CNPPD1Q9BV87 410 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 BARHL1Q9BZE3 327 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 SMURF1Q9HCE7 757 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 PRDM9Q9NQV7 894 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 SEMA4GQ9NTN9 838 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 NDUFB11Q9NX14 153 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 PTGFRNQ9P2B2 879 aa21.09■□□□□ 0.97
LDB1-201ENST00000361198 OR5K3A6NET4 321 aa21.08■□□□□ 0.97
LDB1-201ENST00000361198 DYRK3O43781 588 aa21.08■□□□□ 0.97
LDB1-201ENST00000361198 NTN1O95631 604 aa21.08■□□□□ 0.97
LDB1-201ENST00000361198 CHRNB1P11230 501 aa21.08■□□□□ 0.97
LDB1-201ENST00000361198 PRKAR1BP31321 381 aa21.08■□□□□ 0.97
LDB1-201ENST00000361198 SHC2P98077 582 aa21.08■□□□□ 0.97
LDB1-201ENST00000361198 ZNF655Q8N720 491 aaPredicted RBP21.08■□□□□ 0.97
LDB1-201ENST00000361198 IL17RDQ8NFM7 739 aa21.08■□□□□ 0.97
LDB1-201ENST00000361198 DIO2Q92813 273 aa21.08■□□□□ 0.97
LDB1-201ENST00000361198 CEP19Q96LK0 163 aa21.08■□□□□ 0.97
LDB1-201ENST00000361198 CTRCQ99895 268 aa21.08■□□□□ 0.97
LDB1-201ENST00000361198 IL21RQ9HBE5 538 aa21.08■□□□□ 0.97
LDB1-201ENST00000361198 TMEM165Q9HC07 324 aa21.08■□□□□ 0.97
LDB1-201ENST00000361198 FAM60AQ9NP50 221 aa21.08■□□□□ 0.97
LDB1-201ENST00000361198 TVP23BQ9NYZ1 205 aa21.08■□□□□ 0.97
LDB1-201ENST00000361198 CYR61O00622 381 aa21.08■□□□□ 0.96
LDB1-201ENST00000361198 APOA1P02647 267 aa21.08■□□□□ 0.96
LDB1-201ENST00000361198 ACP2P11117 423 aa21.08■□□□□ 0.96
LDB1-201ENST00000361198 NDUFA9Q16795 377 aa21.08■□□□□ 0.96
LDB1-201ENST00000361198 TYW3Q6IPR3 259 aaKnown RBP21.08■□□□□ 0.96
LDB1-201ENST00000361198 SYT13Q7L8C5 426 aa21.08■□□□□ 0.96
LDB1-201ENST00000361198 OOSP2Q86WS3 158 aa21.08■□□□□ 0.96
LDB1-201ENST00000361198 ZDHHC1Q8WTX9 485 aa21.08■□□□□ 0.96
LDB1-201ENST00000361198 MSANTD3Q96H12 275 aa21.08■□□□□ 0.96
LDB1-201ENST00000361198 TSSK6Q9BXA6 273 aa21.08■□□□□ 0.96
LDB1-201ENST00000361198 TPSD1Q9BZJ3 242 aa21.08■□□□□ 0.96
LDB1-201ENST00000361198 TTYH1Q9H313 450 aaPredicted RBP21.08■□□□□ 0.96
LDB1-201ENST00000361198 KLHL3Q9UH77 587 aa21.08■□□□□ 0.96
LDB1-201ENST00000361198 STUB1Q9UNE7 303 aa21.08■□□□□ 0.96
LDB1-201ENST00000361198 SPTBP11277 2137 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 ZNF670-ZNF695F2Z2N8 137 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 MBTPS2O43462 519 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 GALR3O60755 368 aaPredicted RBP21.07■□□□□ 0.96
LDB1-201ENST00000361198 AGR2O95994 175 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 CTSBP07858 339 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 CASP3P42574 277 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 MLLT11Q13015 90 aaPredicted RBP21.07■□□□□ 0.96
LDB1-201ENST00000361198 CARTPTQ16568 116 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 ENTPD8Q5MY95 495 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 CCNJQ5T5M9 372 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 FHL5Q5TD97 284 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 KLHDC7BQ96G42 594 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 POLDIP3Q9BY77 421 aaKnown RBP21.07■□□□□ 0.96
LDB1-201ENST00000361198 EXOSC4Q9NPD3 245 aaKnown RBP21.07■□□□□ 0.96
LDB1-201ENST00000361198 ADAP2Q9NPF8 381 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 POU2F3Q9UKI9 436 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 C19orf53Q9UNZ5 99 aaPredicted RBP21.07■□□□□ 0.96
LDB1-201ENST00000361198 NTNG1Q9Y2I2 539 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 WDR45Q9Y484 360 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 SLC35F4A4IF30 521 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 B4DGG1 531 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 ST6GAL1P15907 406 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 GIPRP48546 466 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 GINS1Q14691 196 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 DEFB110Q30KQ9 67 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 ARHGAP11BQ3KRB8 267 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 PUS10Q3MIT2 529 aaKnown RBP21.07■□□□□ 0.96
LDB1-201ENST00000361198 MANEAQ5SRI9 462 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 ACSM5Q6NUN0 579 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 CACTIN-AS1Q8N1I8 211 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 FGF11Q92914 225 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 TRMT61AQ96FX7 289 aaKnown RBP21.07■□□□□ 0.96
LDB1-201ENST00000361198 PLA2G12AQ9BZM1 189 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 POLR2J2Q9GZM3 115 aaKnown RBP21.07■□□□□ 0.96
LDB1-201ENST00000361198 MTHFD2LQ9H903 347 aaPredicted RBP21.07■□□□□ 0.96
LDB1-201ENST00000361198 ERVK13-1Q9NX77 482 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms