RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 SEC61A1P61619 476 aaKnown RBP4.23□□□□□ -1.73
PTPN22-201ENST00000359785 PPP2CBP62714 309 aa4.23□□□□□ -1.73
PTPN22-201ENST00000359785 PPP2CAP67775 309 aa4.23□□□□□ -1.73
PTPN22-201ENST00000359785 IRF4Q15306 451 aa4.23□□□□□ -1.73
PTPN22-201ENST00000359785 ZXDCQ2QGD7 858 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-201ENST00000359785 MARC1Q5VT66 337 aa4.23□□□□□ -1.73
PTPN22-201ENST00000359785 TRIQKQ629K1 86 aa4.23□□□□□ -1.73
PTPN22-201ENST00000359785 FAM131AQ6UXB0 335 aa4.23□□□□□ -1.73
PTPN22-201ENST00000359785 ZER1Q7Z7L7 766 aa4.23□□□□□ -1.73
PTPN22-201ENST00000359785 MON1AQ86VX9 555 aa4.23□□□□□ -1.73
PTPN22-201ENST00000359785 SYTL1Q8IYJ3 562 aa4.23□□□□□ -1.73
PTPN22-201ENST00000359785 OR13D1Q8NGV5 346 aa4.23□□□□□ -1.73
PTPN22-201ENST00000359785 MED8Q96G25 268 aa4.23□□□□□ -1.73
PTPN22-201ENST00000359785 RCC1LQ96I51 464 aaKnown RBP4.23□□□□□ -1.73
PTPN22-201ENST00000359785 F2RL3Q96RI0 385 aa4.23□□□□□ -1.73
PTPN22-201ENST00000359785 DDOQ99489 341 aa4.23□□□□□ -1.73
PTPN22-201ENST00000359785 C2orf88Q9BSF0 95 aa4.23□□□□□ -1.73
PTPN22-201ENST00000359785 PTDSS2Q9BVG9 487 aa4.23□□□□□ -1.73
PTPN22-201ENST00000359785 SCRT1Q9BWW7 348 aa4.23□□□□□ -1.73
PTPN22-201ENST00000359785 RSPO3Q9BXY4 272 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-201ENST00000359785 MED28Q9H204 178 aa4.23□□□□□ -1.73
PTPN22-201ENST00000359785 CLEC4MQ9H2X3 399 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-201ENST00000359785 SLCO5A1Q9H2Y9 848 aa4.23□□□□□ -1.73
PTPN22-201ENST00000359785 ANKRD10Q9NXR5 420 aa4.23□□□□□ -1.73
PTPN22-201ENST00000359785 TAS2R8Q9NYW2 309 aa4.23□□□□□ -1.73
PTPN22-201ENST00000359785 EIF2B4Q9UI10 523 aaKnown RBP4.23□□□□□ -1.73
PTPN22-201ENST00000359785 IPPQ9Y573 584 aa4.23□□□□□ -1.73
PTPN22-201ENST00000359785 SHISA3A0PJX4 238 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 PROB1E7EW31 1015 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 DDX39AO00148 427 aaKnown RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 TGOLN2O43493 480 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 NBNO60934 754 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 SH3BGRLO75368 114 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 RASGRP1O95267 797 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 MT-CYBP00156 380 aaPredicted RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 FSTP19883 344 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 DPP4P27487 766 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 NDUFS1P28331 727 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 LCN1P31025 176 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 CCT3P49368 545 aaKnown RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 SEPHS1P49903 392 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 ACTR1AP61163 376 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 DLK1P80370 383 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 HGFACQ04756 655 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 HNRNPA0Q13151 305 aaKnown RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 PIN1Q13526 163 aaPredicted RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 CCDC157Q569K6 752 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 SLC35D3Q5M8T2 416 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 TMEM244Q5VVB8 128 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 TRAF7Q6Q0C0 670 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 Q6ZSR3 168 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 PDZD3Q86UT5 571 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 MISPQ8IVT2 679 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 ARL6IP6Q8N6S5 226 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 GPRC5AQ8NFJ5 357 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 GPR32P1Q8NGA4 272 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 OR4K1Q8NGD4 311 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 OR52P1PQ8NH57 321 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 SPATA22Q8NHS9 363 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 SLC25A28Q96A46 364 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 ALG14Q96F25 216 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 PACRGQ96M98 296 aaPredicted RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 STACQ99469 402 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 THAP7Q9BT49 309 aaPredicted RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 ZBED2Q9BTP6 218 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 TSSK6Q9BXA6 273 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 ABHD16BQ9H3Z7 469 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 FBXO44Q9H4M3 255 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 TPT1P8Q9HAU6 139 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 SEMA4GQ9NTN9 838 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 HCN3Q9P1Z3 774 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 AASSQ9UDR5 926 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 TNFSF18Q9UNG2 199 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 DLGAP4Q9Y2H0 992 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 TIMM10BQ9Y5J6 103 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 PCYT1BQ9Y5K3 369 aaPredicted RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 FLVCR1Q9Y5Y0 555 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 A0A087WWC5 75 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 TRBV5-7A0A0A0MS05 114 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 SUPT3HB4E1H0 165 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 GTPBP1O00178 669 aaKnown RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 INSIG1O15503 277 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 BCL2L11O43521 198 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 PRAMEF2O60811 474 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 ULK1O75385 1050 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 PDYNP01213 254 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 TRBC1P01850 177 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 VTNP04004 478 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 ELK1P19419 428 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 ATP5A1P25705 553 aaKnown RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 UBE2IP63279 158 aaKnown RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 DSC1Q08554 894 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 GAGE1Q13065 139 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 GAB1Q13480 694 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 RPS6KA2Q15349 733 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 CHRNA6Q15825 494 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 HES5Q5TA89 166 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 NADSYN1Q6IA69 706 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms