RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 REEP1Q9H902 201 aa12.84□□□□□ -0.35
PDLIM5-203ENST00000359265 MTHFD2LQ9H903 347 aaPredicted RBP12.84□□□□□ -0.35
PDLIM5-203ENST00000359265 WDR54Q9H977 334 aa12.84□□□□□ -0.35
PDLIM5-203ENST00000359265 NTN4Q9HB63 628 aa12.84□□□□□ -0.35
PDLIM5-203ENST00000359265 COPS7AQ9UBW8 275 aa12.84□□□□□ -0.35
PDLIM5-203ENST00000359265 C19orf25Q9UFG5 118 aaPredicted RBP12.84□□□□□ -0.35
PDLIM5-203ENST00000359265 C3orf18Q9UK00 162 aa12.84□□□□□ -0.35
PDLIM5-203ENST00000359265 SLC9A8Q9Y2E8 581 aa12.84□□□□□ -0.35
PDLIM5-203ENST00000359265 IFT52Q9Y366 437 aa12.84□□□□□ -0.35
PDLIM5-203ENST00000359265 SH3GLB1Q9Y371 365 aa12.84□□□□□ -0.35
PDLIM5-203ENST00000359265 PCDHGA3Q9Y5H0 932 aa12.84□□□□□ -0.35
PDLIM5-203ENST00000359265 B3GALT1Q9Y5Z6 326 aa12.84□□□□□ -0.35
PDLIM5-203ENST00000359265 EXPH5Q8NEV8 1989 aa12.83□□□□□ -0.35
PDLIM5-203ENST00000359265 GXYLT2A0PJZ3 443 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 SOCS2O14508 198 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 KIAA0513O60268 411 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 RASAL1O95294 804 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 DDAH2O95865 285 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 IGKV3-11P04433 115 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 ZNF26P17031 533 aaPredicted RBP12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 TNFRSF1BP20333 461 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 ATP6V1C1P21283 382 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 PRKAR1BP31321 381 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 ETV5P41161 510 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 OR1E2P47887 323 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 ARHGDIAP52565 204 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 TARDBPQ13148 414 aaKnown RBP eCLIP12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 LARS2Q15031 903 aaKnown RBP12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 GPR68Q15743 365 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 EIPR1Q53HC9 387 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 CMPK2Q5EBM0 449 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 ZNF311Q5JNZ3 666 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 CCNJQ5T5M9 372 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 FAAH2Q6GMR7 532 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 DHRS4L2Q6PKH6 230 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 FAM198BQ6UWH4 519 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 LANCL3Q6ZV70 420 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 ANKRD37Q7Z713 158 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 CARM1Q86X55 608 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 HIPK1Q86Z02 1210 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 ZDHHC13Q8IUH4 622 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 CBR4Q8N4T8 237 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 LSM14AQ8ND56 463 aaKnown RBP12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 OR52P1PQ8NH57 321 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 ZNF721Q8TF20 911 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 PMEPA1Q969W9 287 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 BTBD9Q96Q07 612 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 SPSB2Q99619 263 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 SAP130Q9H0E3 1048 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 KLHL28Q9NXS3 571 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 NDUFAF4Q9P032 175 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 ZNF232Q9UNY5 417 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 SAMHD1Q9Y3Z3 626 aaKnown RBP12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 FAM32AQ9Y421 112 aaKnown RBP12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 OR10H1Q9Y4A9 318 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 ENPP4Q9Y6X5 453 aa12.83□□□□□ -0.36
PDLIM5-203ENST00000359265 SAGE2PA6NJ88 616 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 OR6C76A6NM76 312 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 G3V2T6 193 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 PDLIM1O00151 329 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 EI24O14681 340 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 ACOX3O15254 700 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 CNOT3O75175 753 aaKnown RBP12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 DNAJB5O75953 348 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 STK17BO94768 372 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 DIRAS1O95057 198 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 KCNK2O95069 426 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 HPRP00739 348 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 DBIP07108 87 aaKnown RBP12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 THBS1P07996 1170 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 CD63P08962 238 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 RHCEP18577 417 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 FPR1P21462 350 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 RPS4Y1P22090 263 aaKnown RBP12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 DNAJA1P31689 397 aaKnown RBP12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 DCTP40126 519 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 SLC37A1P57057 533 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 DCAF7P61962 342 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 SPIBQ01892 262 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 GK3PQ14409 553 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 NRF1Q16656 503 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 CYP27C1Q4G0S4 372 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 IQCCQ4KMZ1 466 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 LIN52Q52LA3 116 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 HLA-DQA1Q5Y7H0 255 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 LCN10Q6JVE6 187 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 SHQ1Q6PI26 577 aaKnown RBP12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 FIGNL1Q6PIW4 674 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 NPSR1Q6W5P4 371 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 SLC29A4Q7RTT9 530 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 STK32CQ86UX6 486 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 CYP4Z1Q86W10 505 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 GALNT6Q8NCL4 622 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 OR1N1Q8NGS0 311 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 VANGL1Q8TAA9 524 aaPredicted RBP12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 APOBEC4Q8WW27 367 aaKnown RBP12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 EPYCQ99645 322 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 SLC29A1Q99808 456 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 G6PC3Q9BUM1 346 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 NUDT9Q9BW91 350 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms