RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 CCDC88CQ9P219 2028 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 A0A1W2PQM1 296 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 AGAP5A6NIR3 686 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 A8MU76 341 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 ZNF99A8MXY4 864 aaPredicted RBP12.37□□□□□ -0.43
NFIX-201ENST00000358552 TMX2-CTNND1H3BSU7 103 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 SLC1A7O00341 560 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 AP3D1O14617 1153 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 FLRT2O43155 660 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 FMO6PO60774 539 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 CBX7O95931 251 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 ADAP00813 363 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 CTSBP07858 339 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 ACP2P11117 423 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 S1PR1P21453 382 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 TRHRP34981 398 aaPredicted RBP12.37□□□□□ -0.43
NFIX-201ENST00000358552 RORAP35398 523 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 MPLP40238 635 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 DAPP51397 102 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 ID2Q02363 134 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 CD47Q08722 323 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 ST3GAL3Q11203 375 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 KCNAB1Q14722 419 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 ELAVL1Q15717 326 aaKnown RBP12.37□□□□□ -0.43
NFIX-201ENST00000358552 GTF2IRD2BQ6EKJ0 949 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 TYW3Q6IPR3 259 aaKnown RBP12.37□□□□□ -0.43
NFIX-201ENST00000358552 FRRS1Q6ZNA5 592 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 TSEN54Q7Z6J9 526 aaKnown RBP12.37□□□□□ -0.43
NFIX-201ENST00000358552 GTF2IRD2Q86UP8 949 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 OR14A16Q8NHC5 309 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 FCGR1BQ92637 280 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 CDS1Q92903 461 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 PLEKHA8Q96JA3 519 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 SLC46A1Q96NT5 459 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 ARHGDIGQ99819 225 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 LRFN3Q9BTN0 628 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 YIPF2Q9BWQ6 316 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 GABARAPL3Q9BY60 117 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 HOXD1Q9GZZ0 328 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 KRCC1Q9NPI7 259 aaPredicted RBP12.37□□□□□ -0.43
NFIX-201ENST00000358552 LANCL2Q9NS86 450 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 AKAP7Q9P0M2 348 aaPredicted RBP12.37□□□□□ -0.43
NFIX-201ENST00000358552 ENPP5Q9UJA9 477 aa12.37□□□□□ -0.43
NFIX-201ENST00000358552 IGHV5-10-1A0A0J9YXX1 117 aa12.36□□□□□ -0.43
NFIX-201ENST00000358552 PATE3B3GLJ2 98 aa12.36□□□□□ -0.43
NFIX-201ENST00000358552 KPNA4O00629 521 aaPredicted RBP12.36□□□□□ -0.43
NFIX-201ENST00000358552 KIAA0513O60268 411 aa12.36□□□□□ -0.43
NFIX-201ENST00000358552 BRINP1O60477 761 aa12.36□□□□□ -0.43
NFIX-201ENST00000358552 DIRAS1O95057 198 aa12.36□□□□□ -0.43
NFIX-201ENST00000358552 MED26O95402 600 aa12.36□□□□□ -0.43
NFIX-201ENST00000358552 INHBBP09529 407 aa12.36□□□□□ -0.43
NFIX-201ENST00000358552 RPS4Y1P22090 263 aaKnown RBP12.36□□□□□ -0.43
NFIX-201ENST00000358552 PRKACGP22612 351 aa12.36□□□□□ -0.43
NFIX-201ENST00000358552 ACP1P24666 158 aa12.36□□□□□ -0.43
NFIX-201ENST00000358552 CSTF2P33240 577 aaKnown RBP eCLIP12.36□□□□□ -0.43
NFIX-201ENST00000358552 GABRA3P34903 492 aa12.36□□□□□ -0.43
NFIX-201ENST00000358552 MAT1AQ00266 395 aaKnown RBP12.36□□□□□ -0.43
NFIX-201ENST00000358552 ZNF155Q12901 538 aaPredicted RBP12.36□□□□□ -0.43
NFIX-201ENST00000358552 NPRL3Q12980 569 aa12.36□□□□□ -0.43
NFIX-201ENST00000358552 PERM1Q5SV97 790 aa12.36□□□□□ -0.43
NFIX-201ENST00000358552 ARHGAP40Q5TG30 622 aa12.36□□□□□ -0.43
NFIX-201ENST00000358552 XAF1Q6GPH4 301 aa12.36□□□□□ -0.43
NFIX-201ENST00000358552 ZNF574Q6ZN55 896 aaPredicted RBP12.36□□□□□ -0.43
NFIX-201ENST00000358552 RANBP3LQ86VV4 465 aaPredicted RBP12.36□□□□□ -0.43
NFIX-201ENST00000358552 PPP1R3BQ86XI6 285 aa12.36□□□□□ -0.43
NFIX-201ENST00000358552 CMIPQ8IY22 773 aa12.36□□□□□ -0.43
NFIX-201ENST00000358552 SLC38A4Q969I6 547 aa12.36□□□□□ -0.43
NFIX-201ENST00000358552 OR10A5Q9H207 317 aa12.36□□□□□ -0.43
NFIX-201ENST00000358552 ARRDC1-AS1Q9H2J1 176 aa12.36□□□□□ -0.43
NFIX-201ENST00000358552 VNN3Q9NY84 501 aa12.36□□□□□ -0.43
NFIX-201ENST00000358552 MAGED1Q9Y5V3 778 aaPredicted RBP12.36□□□□□ -0.43
NFIX-201ENST00000358552 CLCA3PQ9Y6N3 262 aa12.36□□□□□ -0.43
NFIX-201ENST00000358552 ASCC3Q8N3C0 2202 aaKnown RBP12.35□□□□□ -0.43
NFIX-201ENST00000358552 WDR87Q6ZQQ6 2873 aa12.35□□□□□ -0.43
NFIX-201ENST00000358552 IGLV3-12A0A075B6K2 115 aa12.35□□□□□ -0.43
NFIX-201ENST00000358552 IGKV3D-11A0A0A0MRZ8 115 aa12.35□□□□□ -0.43
NFIX-201ENST00000358552 NTN3O00634 580 aaPredicted RBP12.35□□□□□ -0.43
NFIX-201ENST00000358552 POLR1CO15160 346 aaPredicted RBP12.35□□□□□ -0.43
NFIX-201ENST00000358552 MPZL2O60487 215 aa12.35□□□□□ -0.43
NFIX-201ENST00000358552 ANGPTL1O95841 491 aa12.35□□□□□ -0.43
NFIX-201ENST00000358552 CD63P08962 238 aa12.35□□□□□ -0.43
NFIX-201ENST00000358552 NID1P14543 1247 aa12.35□□□□□ -0.43
NFIX-201ENST00000358552 ENDOUP21128 410 aaKnown RBP12.35□□□□□ -0.43
NFIX-201ENST00000358552 GSTM3P21266 225 aa12.35□□□□□ -0.43
NFIX-201ENST00000358552 SOX18P35713 384 aa12.35□□□□□ -0.43
NFIX-201ENST00000358552 EMDP50402 254 aa12.35□□□□□ -0.43
NFIX-201ENST00000358552 PDX1P52945 283 aa12.35□□□□□ -0.43
NFIX-201ENST00000358552 IL5RAQ01344 420 aa12.35□□□□□ -0.43
NFIX-201ENST00000358552 TEKQ02763 1124 aa12.35□□□□□ -0.43
NFIX-201ENST00000358552 CDK5R2Q13319 367 aa12.35□□□□□ -0.43
NFIX-201ENST00000358552 ZNF267Q14586 743 aaPredicted RBP12.35□□□□□ -0.43
NFIX-201ENST00000358552 DGUOKQ16854 277 aa12.35□□□□□ -0.43
NFIX-201ENST00000358552 EXOC3L2Q2M3D2 409 aa12.35□□□□□ -0.43
NFIX-201ENST00000358552 CYP27C1Q4G0S4 372 aa12.35□□□□□ -0.43
NFIX-201ENST00000358552 FGD3Q5JSP0 725 aa12.35□□□□□ -0.43
NFIX-201ENST00000358552 LAIR1Q6GTX8 287 aa12.35□□□□□ -0.43
NFIX-201ENST00000358552 SLITRK4Q8IW52 837 aa12.35□□□□□ -0.43
NFIX-201ENST00000358552 DEPDC4Q8N2C3 294 aa12.35□□□□□ -0.43
NFIX-201ENST00000358552 ABTB1Q969K4 478 aaPredicted RBP12.35□□□□□ -0.43
NFIX-201ENST00000358552 OTUB1Q96FW1 271 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms