RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 GDPD3Q7L5L3 318 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 DCUN1D3Q8IWE4 304 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 LRRC52Q8N7C0 313 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 NPEPL1Q8NDH3 523 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 OR51D1Q8NGF3 324 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 CA5BP1Q8WTZ4 195 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 KLRG1Q96E93 195 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 HRASLS5Q96KN8 279 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 MACROD1Q9BQ69 325 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 DUSP23Q9BVJ7 150 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 TFB2MQ9H5Q4 396 aaKnown RBP5.5□□□□□ -1.53
BRCA1-203ENST00000357654 RNF150Q9ULK6 438 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 DISP2A7MBM2 1401 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 J3KR12 359 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 RP2O75695 350 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 SORBS2O94875 1100 aaKnown RBP5.5□□□□□ -1.53
BRCA1-203ENST00000357654 TLE4Q04727 773 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 UBE2NLQ5JXB2 153 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 MRPL10Q7Z7H8 261 aaKnown RBP5.5□□□□□ -1.53
BRCA1-203ENST00000357654 OR14K1Q8NGZ2 314 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 UBE2FQ969M7 185 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 TBC1D20Q96BZ9 403 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 WDR18Q9BV38 432 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 EDEM2Q9BV94 578 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 PLA2G12BQ9BX93 195 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 RHOJQ9H4E5 214 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 UFSP2Q9NUQ7 469 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 SLC17A7Q9P2U7 560 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 TMEM131LA2VDJ0 1609 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 NRKQ7Z2Y5 1582 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 CLIC1O00299 241 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 ACOX3O15254 700 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 SCRG1O75711 98 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 CAPN3P20807 821 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 NOVA1P51513 510 aaKnown RBP5.5□□□□□ -1.53
BRCA1-203ENST00000357654 CRMP1Q14194 572 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 EMC10Q5UCC4 262 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 GSG1LQ6UXU4 331 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 NIPA2Q8N8Q9 360 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 BHLHE23Q8NDY6 225 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 OR5M1Q8NGP8 315 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 OR4K13Q8NH42 304 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 DTD1Q8TEA8 209 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 GEMIN6Q8WXD5 167 aaKnown RBP5.5□□□□□ -1.53
BRCA1-203ENST00000357654 MYLIPQ8WY64 445 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 SLC30A2Q9BRI3 323 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 ITM2CQ9NQX7 267 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 SPHK2Q9NRA0 654 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 SACM1LQ9NTJ5 587 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 OLAHQ9NV23 265 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 PCDHGB6Q9Y5F9 930 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 RAB19A4D1S5 217 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 PMS2P1A4D2B8 440 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 RCCD1A6NED2 376 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 LOC730098B7Z3J9 87 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 CILPO75339 1184 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 TMEM63AO94886 807 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 OAS1P00973 400 aaKnown RBP5.5□□□□□ -1.53
BRCA1-203ENST00000357654 ESR1P03372 595 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 ACPPP15309 386 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 BDKRB2P30411 391 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 LCN1P31025 176 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 HOXA11P31270 313 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-203ENST00000357654 CSNK1EP49674 416 aaKnown RBP5.5□□□□□ -1.53
BRCA1-203ENST00000357654 CTXN1P60606 82 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 RHOBP62745 196 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 RPS26P62854 115 aaKnown RBP5.5□□□□□ -1.53
BRCA1-203ENST00000357654 NTHL1P78549 312 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 LMAN2Q12907 356 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 SIRPB2Q5JXA9 342 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 MFSD12Q6NUT3 480 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 XYLT1Q86Y38 959 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 NTAN1Q96AB6 310 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 DPH7Q9BTV6 452 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 EGLN1Q9GZT9 426 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 MFFQ9GZY8 342 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 SLC25A51Q9H1U9 297 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 ARRDC1-AS1Q9H2J1 176 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 KCNK12Q9HB15 430 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 FAIMQ9NVQ4 179 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 CLEC1BQ9P126 229 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 OSGIN2Q9Y236 505 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 RNF11Q9Y3C5 154 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 TRBV2A0A0J9YWF9 115 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 ZNF785A8K8V0 405 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 ZNF732B4DXR9 585 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 CYR61O00622 381 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 KCNAB3O43448 404 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 GLCEO94923 617 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 CKMT1AP12532 417 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 GSTT1P30711 240 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 DCAF12L1Q5VU92 463 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 PODNL1Q6PEZ8 512 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 FIGLAQ6QHK4 219 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 TSSK4Q6SA08 328 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 NIPA1Q7RTP0 329 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 SSX9Q7RTT3 188 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 SLC16A14Q7RTX9 510 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 OR51L1Q8NGJ5 315 aa5.5□□□□□ -1.53
BRCA1-203ENST00000357654 MAFAQ8NHW3 353 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms