RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 ARMC5Q96C12 935 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 COQ10AQ96MF6 247 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZNF607Q96SK3 696 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 GPA33Q99795 319 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 EFCAB11Q9BUY7 163 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 B3GAT2Q9NPZ5 323 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 EQTNQ9NQ60 294 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 KCMF1Q9P0J7 381 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZFR2Q9UPR6 939 aaKnown RBP7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 CCL26Q9Y258 94 aa7.75□□□□□ -1.17
CDC42SE1-201ENST00000357235 M0R233 179 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 DNASE2O00115 360 aaPredicted RBP7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 LGALS8O00214 317 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 PITPNM1O00562 1244 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 PQBP1O60828 265 aaKnown RBP7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 PRKRAO75569 313 aaKnown RBP7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 C1orf105O95561 183 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 CBX7O95931 251 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 ANXA3P12429 323 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 SELLP14151 372 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 ITGB7P26010 798 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 RPL3P39023 403 aaKnown RBP7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 MTNR1AP48039 350 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 SLC16A1P53985 500 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 LGALSLQ3ZCW2 172 aaPredicted RBP7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 FCRLBQ6BAA4 426 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 SLC30A6Q6NXT4 461 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZNF730Q6ZMV8 503 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZNF655Q8N720 491 aaPredicted RBP7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 CLDN22Q8N7P3 220 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 GOT1L1Q8NHS2 421 aaPredicted RBP7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 KLK6Q92876 244 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 ECHDC3Q96DC8 303 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 CXorf40BQ96DE9 158 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 IGSF21Q96ID5 467 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 EMC7Q9NPA0 242 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 BIN3Q9NQY0 253 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 PFDN2Q9UHV9 154 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 DTX4Q9Y2E6 619 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 INSL5Q9Y5Q6 135 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 SERTM1A2A2V5 107 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 DVL2O14641 736 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 LALBAP00709 142 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 C21orf58P58505 322 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 TAP2Q03519 686 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 KLHL22Q53GT1 634 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 BCL2L15Q5TBC7 163 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZDHHC20Q5W0Z9 365 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 ASTLQ6HA08 431 aaPredicted RBP7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 C5orf46Q6UWT4 87 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 HSDL2Q6YN16 418 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 Q6ZNB5 142 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 DDX53Q86TM3 631 aaKnown RBP7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 COMTD1Q86VU5 262 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 CACUL1Q86Y37 369 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 STPG2Q8N412 459 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 OR6T1Q8NGN1 323 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 OR2A12Q8NGT7 310 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 WBP1Q96G27 269 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZNF354BQ96LW1 612 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 MACROD1Q9BQ69 325 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 TMEM175Q9BSA9 504 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZNF436Q9C0F3 470 aaPredicted RBP7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZNF768Q9H5H4 540 aaKnown RBP7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 KLHL1Q9NR64 748 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 GSN-AS1Q9NRJ2 163 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZCCHC3Q9NUD5 404 aaKnown RBP7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZNF624Q9P2J8 865 aaPredicted RBP7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 FBXW2Q9UKT8 454 aa7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 RPH3AQ9Y2J0 694 aaPredicted RBP7.74□□□□□ -1.17
CDC42SE1-201ENST00000357235 DSPPQ9NZW4 1301 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 A0A0G2JPF8 293 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 A0A1W2PQ45 241 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 A0A1W2PQY0 241 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 A8MVJ9 347 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 A8MXK9 166 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 HNRNPCL3B7ZW38 293 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 HMGN4O00479 90 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 NRG2O14511 850 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 NPC1O15118 1278 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 PPM1DO15297 605 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 GRM6O15303 877 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZNF806P0C7X5 589 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 HNRNPCL4P0DMR1 293 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 CPEP16870 476 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 STOMP27105 288 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 PPP2R1BP30154 601 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 VIPR1P32241 457 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 SMSP52788 366 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 CAP1Q01518 475 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 PLK5Q496M5 336 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 C12orf73Q69YU5 71 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 RAET1GQ6H3X3 334 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 ATRAIDQ6UW56 229 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 NXPE4Q6UWF7 544 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 STX12Q86Y82 276 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 KIAA1143Q96AT1 154 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 NXPE2Q96DL1 559 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms