RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 DYRK1AQ13627 763 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 CLEC14AQ86T13 490 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 SNX29P2Q8IUI4 249 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 KCT2Q8NC54 265 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 NRG4Q8WWG1 115 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 NT5C3BQ969T7 300 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 ADAD1Q96M93 576 aaKnown RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 ZNF300Q96RE9 604 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 ALG8Q9BVK2 526 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 POLDIP3Q9BY77 421 aaKnown RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 OR11A1Q9GZK7 315 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 RNF181Q9P0P0 153 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 A0A1W2PQH9 124 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 CXorf49A8MYA2 514 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 RFXAPO00287 272 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 GPR39O43194 453 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 MED6O75586 246 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 INHAP05111 366 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 ZBTB48P10074 688 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 SHMT2P34897 504 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 MAXP61244 160 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 ANKRD16Q6P6B7 361 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 OR9A4Q8NGU2 314 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 SLC39A7Q92504 469 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 MARVELD3Q96A59 401 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 LIN37Q96GY3 246 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 OR51I1Q9H343 314 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 CERS4Q9HA82 394 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 SLC7A11Q9UPY5 501 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 ENDOD1O94919 500 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 HCKP08631 526 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 ITGA5P08648 1049 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 HOXC13P31276 330 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 RFX2P48378 723 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 SSX9Q7RTT3 188 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 ZBTB46Q86UZ6 589 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 NPAS4Q8IUM7 802 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 BCL7CQ8WUZ0 217 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 P2RX7Q99572 595 aaKnown RBP6.24□□□□□ -1.41
VPS13B-202ENST00000357162 SEC61A2Q9H9S3 476 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 IL26Q9NPH9 171 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 SOHLH2Q9NX45 425 aa6.24□□□□□ -1.41
VPS13B-202ENST00000357162 TSPAN6O43657 245 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 KDELR3O43731 214 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 ADRB1P08588 477 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 PPA1Q15181 289 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 ELP2Q6IA86 826 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 SLC8B1Q6J4K2 584 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 ZFP90Q8TF47 636 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 PWWP2AQ96N64 755 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 NICN1Q9BSH3 213 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 TMEM38AQ9H6F2 299 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 POU2F1P14859 743 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 CNR1P21554 472 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 MAOBP27338 520 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 TNFSF9P41273 254 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 ZNF546Q86UE3 836 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 LRRTM4Q86VH4 590 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 PLA2G15Q8NCC3 412 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 NFKBIDQ8NI38 313 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 ACOT11Q8WXI4 607 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-202ENST00000357162 MYLIPQ8WY64 445 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 GPR83Q9NYM4 423 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 SARDHQ9UL12 918 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 YJEFN3A6XGL0 299 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 SGK494L7N484 410 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 ARHGAP33O14559 1287 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 MT-CYBP00156 380 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-202ENST00000357162 LPLP06858 475 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 FKBP2P26885 142 aaKnown RBP6.23□□□□□ -1.41
VPS13B-202ENST00000357162 SUMF2Q8NBJ7 301 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 CLRN3Q8NCR9 226 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 DAZLQ92904 295 aaKnown RBP6.23□□□□□ -1.41
VPS13B-202ENST00000357162 TRIM43Q96BQ3 446 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-202ENST00000357162 SLC12A9Q9BXP2 914 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 MTHFD2LQ9H903 347 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-202ENST00000357162 TMEM100Q9NV29 134 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 ERVK-18Q9QC07 812 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 BPNT1O95861 308 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 GJB1P08034 283 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 C22orf42Q6IC83 251 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 C3orf58Q8NDZ4 430 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 PSMG2Q969U7 264 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 UHRF1Q96T88 793 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-202ENST00000357162 FAM198AQ9UFP1 575 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 CHRNA9Q9UGM1 479 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 FBXO10Q9UK96 956 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 I6L893 689 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-202ENST00000357162 KCNK5O95279 499 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 ADH1BP00325 375 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 TFAP2AP05549 437 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 SMIM6P0DI80 62 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 ZP3P21754 424 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 CASP3P42574 277 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 HMGCS1Q01581 520 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 MPPED2Q15777 294 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 TMEM41BQ5BJD5 291 aa6.23□□□□□ -1.41
VPS13B-202ENST00000357162 DPCDQ9BVM2 203 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-202ENST00000357162 RYDENQ9NUL5 291 aaKnown RBP6.23□□□□□ -1.41
VPS13B-202ENST00000357162 EPHA6Q9UF33 1036 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms