RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 AP2S1P53680 142 aaPredicted RBP9.49□□□□□ -0.89
PTPRA-203ENST00000356147 RPS7P62081 194 aaKnown RBP9.49□□□□□ -0.89
PTPRA-203ENST00000356147 RGS1Q08116 209 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 GPR162Q16538 588 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 ZNF311Q5JNZ3 666 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 SFRP4Q6FHJ7 346 aaPredicted RBP9.49□□□□□ -0.89
PTPRA-203ENST00000356147 HTR3DQ70Z44 454 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 KANSL1Q7Z3B3 1105 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 ADIPOR2Q86V24 386 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 SIAH3Q8IW03 269 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 TMEM255BQ8WV15 326 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 BBS4Q96RK4 519 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 DPH7Q9BTV6 452 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 OR51V1Q9H2C8 321 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 OR51J1Q9H342 316 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 OSGEPL1Q9H4B0 414 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 XKR8Q9H6D3 395 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 C11orf49Q9H6J7 331 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 HEXA-AS1Q9H8Q6 139 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 ELF5Q9UKW6 265 aaPredicted RBP9.49□□□□□ -0.89
PTPRA-203ENST00000356147 ICKQ9UPZ9 632 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 FCMRO60667 390 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 DHFRP00374 187 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 RAF1P04049 648 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 GYPBP06028 91 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 ANKRD34CP0C6C1 535 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 CLUP10909 449 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 SNRPBP14678 240 aaKnown RBP9.49□□□□□ -0.89
PTPRA-203ENST00000356147 CCR2P41597 374 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 PCBP4P57723 403 aaKnown RBP9.49□□□□□ -0.89
PTPRA-203ENST00000356147 ST3GAL2Q16842 350 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 LY6G5CQ5SRR4 150 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 NDUFAF5Q5TEU4 345 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 RNLSQ5VYX0 342 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 TMEM65Q6PI78 240 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 ZNF322Q6U7Q0 402 aaPredicted RBP9.49□□□□□ -0.89
PTPRA-203ENST00000356147 PARS2Q7L3T8 475 aaKnown RBP9.49□□□□□ -0.89
PTPRA-203ENST00000356147 DGLUCYQ7Z3D6 616 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 C17orf64Q86WR6 236 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 LSMEM1Q8N8F7 131 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 GALNT11Q8NCW6 608 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 TRMT10AQ8TBZ6 339 aaKnown RBP9.49□□□□□ -0.89
PTPRA-203ENST00000356147 RIT1Q92963 219 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 ZNF689Q96CS4 500 aaPredicted RBP9.49□□□□□ -0.89
PTPRA-203ENST00000356147 TCEAL4Q96EI5 215 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 LMLNQ96KR4 655 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 PRRC1Q96M27 445 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 ZNF649Q9BS31 505 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 ZDHHC5Q9C0B5 715 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 PIGUQ9H490 435 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 KLHL31Q9H511 634 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 WSB2Q9NYS7 404 aaPredicted RBP9.49□□□□□ -0.89
PTPRA-203ENST00000356147 H2AFY2Q9P0M6 372 aaPredicted RBP9.49□□□□□ -0.89
PTPRA-203ENST00000356147 SLC13A4Q9UKG4 626 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 TMEM5Q9Y2B1 443 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 IRAK3Q9Y616 596 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 SLC9B1P1A6NJY1 282 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 POM121CA8CG34 1229 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 SHOXO15266 292 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 RNF13O43567 381 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 TRIM3O75382 744 aaPredicted RBP9.49□□□□□ -0.89
PTPRA-203ENST00000356147 HPXP02790 462 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 PTGS2P35354 604 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 SSR2P43308 183 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 GPR1P46091 355 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 HCCSP53701 268 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 MESP2Q0VG99 397 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 DSG2Q14126 1118 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 ENTPD8Q5MY95 495 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 BHLHB9Q6PI77 547 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 IDO2Q6ZQW0 420 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 C17orf47Q8NEP4 570 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 WDR89Q96FK6 387 aaPredicted RBP9.49□□□□□ -0.89
PTPRA-203ENST00000356147 GPR137Q96N19 417 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 CACNG6Q9BXT2 260 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 MS4A8Q9BY19 250 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 MRPL9Q9BYD2 267 aaKnown RBP9.49□□□□□ -0.89
PTPRA-203ENST00000356147 RBCK1Q9BYM8 510 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 GHITMQ9H3K2 345 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 C6orf106Q9H6K1 298 aaPredicted RBP9.49□□□□□ -0.89
PTPRA-203ENST00000356147 NEUROD4Q9HD90 331 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 OR6C2Q9NZP2 312 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 SLC23A2Q9UGH3 650 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 FBXL4Q9UKA2 621 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 LIPT1Q9Y234 373 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 WNT6Q9Y6F9 365 aa9.49□□□□□ -0.89
PTPRA-203ENST00000356147 SPEGQ15772 3267 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 SURF4O15260 269 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 CCL16O15467 120 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 RGS11O94810 467 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 LATS1O95835 1130 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 OLFM2O95897 454 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 TCRBP04435 133 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 ANXA3P12429 323 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 AHCYP23526 432 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 DNASE1P24855 282 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 GCGRP47871 477 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 PITPNBP48739 271 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 SNTA1Q13424 505 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 AADACL4Q5VUY2 407 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms