RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 TRMT5Q32P41 509 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-202ENST00000355841 RUNDC3AQ59EK9 446 aa16.39■□□□□ 0.21
PDLIM7-202ENST00000355841 OR2M7Q8NG81 312 aa16.39■□□□□ 0.21
PDLIM7-202ENST00000355841 LRRC58Q96CX6 371 aa16.39■□□□□ 0.21
PDLIM7-202ENST00000355841 TMCO6Q96DC7 493 aa16.39■□□□□ 0.21
PDLIM7-202ENST00000355841 JSRP1Q96MG2 331 aaPredicted RBP16.39■□□□□ 0.21
PDLIM7-202ENST00000355841 ANKRD27Q96NW4 1050 aa16.39■□□□□ 0.21
PDLIM7-202ENST00000355841 DOHHQ9BU89 302 aa16.39■□□□□ 0.21
PDLIM7-202ENST00000355841 RTN4RQ9BZR6 473 aa16.39■□□□□ 0.21
PDLIM7-202ENST00000355841 ARL8BQ9NVJ2 186 aa16.39■□□□□ 0.21
PDLIM7-202ENST00000355841 KLRF1Q9NZS2 232 aa16.39■□□□□ 0.21
PDLIM7-202ENST00000355841 CNIH4Q9P003 139 aa16.39■□□□□ 0.21
PDLIM7-202ENST00000355841 NTNG1Q9Y2I2 539 aa16.39■□□□□ 0.21
PDLIM7-202ENST00000355841 EML6Q6ZMW3 1958 aa16.38■□□□□ 0.21
PDLIM7-202ENST00000355841 EXPH5Q8NEV8 1989 aa16.38■□□□□ 0.21
PDLIM7-202ENST00000355841 ASNA1O43681 348 aa16.38■□□□□ 0.21
PDLIM7-202ENST00000355841 RASAL1O95294 804 aa16.38■□□□□ 0.21
PDLIM7-202ENST00000355841 PSMD4P55036 377 aaKnown RBP16.38■□□□□ 0.21
PDLIM7-202ENST00000355841 SYPL1Q16563 259 aa16.38■□□□□ 0.21
PDLIM7-202ENST00000355841 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.38■□□□□ 0.21
PDLIM7-202ENST00000355841 GRAMD1BQ3KR37 738 aa16.38■□□□□ 0.21
PDLIM7-202ENST00000355841 COQ5Q5HYK3 327 aa16.38■□□□□ 0.21
PDLIM7-202ENST00000355841 ATAD3BQ5T9A4 648 aa16.38■□□□□ 0.21
PDLIM7-202ENST00000355841 HMGN2P46Q86SG4 172 aa16.38■□□□□ 0.21
PDLIM7-202ENST00000355841 ANKFN1Q8N957 763 aa16.38■□□□□ 0.21
PDLIM7-202ENST00000355841 DNAJB8Q8NHS0 232 aa16.38■□□□□ 0.21
PDLIM7-202ENST00000355841 MAL2Q969L2 176 aa16.38■□□□□ 0.21
PDLIM7-202ENST00000355841 CMTM5Q96DZ9 223 aa16.38■□□□□ 0.21
PDLIM7-202ENST00000355841 G6PC3Q9BUM1 346 aa16.38■□□□□ 0.21
PDLIM7-202ENST00000355841 THUMPD3Q9BV44 507 aaKnown RBP16.38■□□□□ 0.21
PDLIM7-202ENST00000355841 EXD2Q9NVH0 621 aa16.38■□□□□ 0.21
PDLIM7-202ENST00000355841 ANAPC2Q9UJX6 822 aa16.38■□□□□ 0.21
PDLIM7-202ENST00000355841 MKLN1Q9UL63 735 aa16.38■□□□□ 0.21
PDLIM7-202ENST00000355841 PCDHGB6Q9Y5F9 930 aa16.38■□□□□ 0.21
PDLIM7-202ENST00000355841 PRAMEF25A6NGN4 478 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 EIF4E1BA6NMX2 242 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 KLRC4-KLRK1H3BQV0 150 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 SCO2O43819 266 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 HS6ST1O60243 411 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 ATP6V1C1P21283 382 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 EVI2BP34910 448 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 PTGDSP41222 190 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 DSTNP60981 165 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 ARHGAP11BQ3KRB8 267 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 GPAT3Q53EU6 434 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 RABL3Q5HYI8 236 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 RNFT1Q5M7Z0 435 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 HEPHL1Q6MZM0 1159 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 APOOLQ6UXV4 268 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 PCYOX1LQ8NBM8 494 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 CHDHQ8NE62 594 aaPredicted RBP16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 ROPN1LQ96C74 230 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 SNRNP40Q96DI7 357 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 TUBA8Q9NY65 449 aaPredicted RBP16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 HRH3Q9Y5N1 445 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 WISP2O76076 250 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 AGR2O95994 175 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 NUDT2P50583 147 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 ANXA11P50995 505 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 GPR68Q15743 365 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 MAPK11Q15759 364 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 FLYWCH1Q4VC44 716 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 OR5M10Q6IEU7 315 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 NANOGP8Q6NSW7 305 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 MARCH3Q86UD3 253 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 GATSQ8NAP1 163 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 FRMD6Q96NE9 622 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 SECISBP2Q96T21 854 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 FAM173AQ9BQD7 235 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 ANGPTL4Q9BY76 406 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 TSPAN10Q9H1Z9 355 aaPredicted RBP16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 PIF1Q9H611 641 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 NANOGQ9H9S0 305 aa16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 RYDENQ9NUL5 291 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-202ENST00000355841 CENPVL1A0A0U1RR11 272 aa16.36■□□□□ 0.21
PDLIM7-202ENST00000355841 FAM166BA8MTA8 275 aa16.36■□□□□ 0.21
PDLIM7-202ENST00000355841 EVPLLA8MZ36 301 aa16.36■□□□□ 0.21
PDLIM7-202ENST00000355841 SUV39H1O43463 412 aa16.36■□□□□ 0.21
PDLIM7-202ENST00000355841 SLC28A2O43868 658 aa16.36■□□□□ 0.21
PDLIM7-202ENST00000355841 FADS1O60427 444 aa16.36■□□□□ 0.21
PDLIM7-202ENST00000355841 TNFRSF21O75509 655 aa16.36■□□□□ 0.21
PDLIM7-202ENST00000355841 STX11O75558 287 aa16.36■□□□□ 0.21
PDLIM7-202ENST00000355841 SOX30O94993 753 aa16.36■□□□□ 0.21
PDLIM7-202ENST00000355841 H6PDO95479 791 aa16.36■□□□□ 0.21
PDLIM7-202ENST00000355841 CBX6O95503 412 aa16.36■□□□□ 0.21
PDLIM7-202ENST00000355841 CHRM4P08173 479 aa16.36■□□□□ 0.21
PDLIM7-202ENST00000355841 NR2F1P10589 423 aa16.36■□□□□ 0.21
PDLIM7-202ENST00000355841 RPP38P78345 283 aaKnown RBP16.36■□□□□ 0.21
PDLIM7-202ENST00000355841 FOXO1Q12778 655 aa16.36■□□□□ 0.21
PDLIM7-202ENST00000355841 RPUSD3Q6P087 351 aaKnown RBP16.36■□□□□ 0.21
PDLIM7-202ENST00000355841 PRICKLE2Q7Z3G6 844 aa16.36■□□□□ 0.21
PDLIM7-202ENST00000355841 SLC38A5Q8WUX1 472 aa16.36■□□□□ 0.21
PDLIM7-202ENST00000355841 ZG16BQ96DA0 208 aa16.36■□□□□ 0.21
PDLIM7-202ENST00000355841 OSBPL11Q9BXB4 747 aa16.36■□□□□ 0.21
PDLIM7-202ENST00000355841 ZNF350Q9GZX5 532 aa16.36■□□□□ 0.21
PDLIM7-202ENST00000355841 QRSL1Q9H0R6 528 aaKnown RBP16.36■□□□□ 0.21
PDLIM7-202ENST00000355841 RUBCNLQ9H714 662 aa16.36■□□□□ 0.21
PDLIM7-202ENST00000355841 ASF1BQ9NVP2 202 aa16.36■□□□□ 0.21
PDLIM7-202ENST00000355841 GID8Q9NWU2 228 aa16.36■□□□□ 0.21
PDLIM7-202ENST00000355841 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms