RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 B4GALT2O60909 372 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 ASGR2P07307 311 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 GABRA5P31644 462 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 VEGFCP49767 419 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 FOXA1P55317 472 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 LEG1Q6P5S2 330 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 GAREM2Q75VX8 874 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 OR4E2Q8NGC2 313 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 OR10K1Q8NGX5 313 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 FNDC9Q8TBE3 224 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 KLK6Q92876 244 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 ICKQ9UPZ9 632 aa12.05□□□□□ -0.48
SYNCRIP-201ENST00000355238 TSPAN6O43657 245 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 EGFP01133 1207 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 ACP2P11117 423 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 CAV2P51636 162 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 TAS2R19P59542 299 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 ARHGAP1Q07960 439 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 RANBP10Q6VN20 620 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 SLC46A3Q7Z3Q1 461 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 LILRB2Q8N423 598 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 V9GY05 133 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 HYKKA2RU49 373 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 GGT3PA6NGU5 568 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 PRSS44E7EML9 344 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 SDC3O75056 442 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 UBE2NLQ5JXB2 153 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 FAM122BQ7Z309 247 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 STEAP2Q8NFT2 490 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 OR5T1Q8NG75 326 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 TMEM163Q8TC26 289 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 SFXN5Q8TD22 340 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 PGAM5Q96HS1 289 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 PINK1Q9BXM7 581 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 ZNF223Q9UK11 482 aaPredicted RBP12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 WDPCPO95876 746 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 CTHP32929 405 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 FLI1Q01543 452 aaPredicted RBP12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 DUSP7Q16829 419 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 ZNF679Q8IYX0 411 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 ZNF461Q8TAF7 563 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 ARNTL2Q8WYA1 636 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 METTL15A6NJ78 407 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 KCNJ13O60928 360 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 NDUFB2O95178 105 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 PCSK6P29122 969 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 FKBP1BP68106 108 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 PDSS1Q5T2R2 415 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 PXT1Q8NFP0 134 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 ZNF689Q96CS4 500 aaPredicted RBP12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 CNTNAP3Q9BZ76 1288 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 ZNF175Q9Y473 711 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 A8MXE2 369 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 ARHGAP33O14559 1287 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 GHRHRQ02643 423 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 ZNF169Q14929 603 aaPredicted RBP12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 ZNF792Q3KQV3 632 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 TCTE1Q5JU00 501 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 CLVS2Q5SYC1 327 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 LAX1Q8IWV1 398 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 KREMEN2Q8NCW0 462 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 RRNAD1Q96FB5 475 aaKnown RBP12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 CTRCQ99895 268 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 BABAM2Q9NXR7 383 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 PSORS1C1Q9UIG5 152 aa12.04□□□□□ -0.48
SYNCRIP-201ENST00000355238 hCG_1807616A0A1W2PRN6 198 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 HRGP04196 525 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 DUSP6Q16828 381 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 TP53I3Q53FA7 332 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 SYT6Q5T7P8 510 aaPredicted RBP12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 OR4C11Q6IEV9 310 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 TSSK4Q6SA08 328 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 LYPD4Q6UWN0 246 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 OR2T11Q8NH01 316 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 METTL2AQ96IZ6 378 aaKnown RBP12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 SYT11Q9BT88 431 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 SLC2A11Q9BYW1 496 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 PPP4R1LQ9P1A2 415 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 SCG5P05408 212 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 CTSOP43234 321 aaPredicted RBP12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 SORDQ00796 357 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 RBMS2Q15434 407 aaKnown RBP12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 APOOLQ6UXV4 268 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 COMMD6Q7Z4G1 85 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 ASPGQ86U10 573 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 MRPL41Q8IXM3 137 aaKnown RBP12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 RNF128Q8TEB7 428 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 F2RL3Q96RI0 385 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 UHRF1Q96T88 793 aaPredicted RBP12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 SLC12A9Q9BXP2 914 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 PTGES2Q9H7Z7 377 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 RCE1Q9Y256 329 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 TSPAN11A1L157 253 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 C2orf78A6NCI8 922 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 GABRPO00591 440 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 TOR1AO14656 332 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 FADS1O60427 444 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 NUDT1P36639 197 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 CDK3Q00526 305 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 ID2Q02363 134 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms