RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 A8MVJ9 347 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 CTDSP2O14595 271 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 NDUFS1P28331 727 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 MRPS21P82921 87 aaKnown RBP12.99□□□□□ -0.33
TRIM4-201ENST00000349062 PRSS48Q7RTY5 328 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 PRICKLE2Q7Z3G6 844 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 PARP16Q8N5Y8 322 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 GAL3ST3Q96A11 431 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 LRR1Q96L50 414 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 SLC38A3Q99624 504 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 CENPOQ9BU64 300 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 ITPAQ9BY32 194 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 GSDMCQ9BYG8 508 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 KLHL28Q9NXS3 571 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 PSORS1C1Q9UIG5 152 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 CENPXA8MT69 81 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 C2orf74A8MZ97 194 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 HRKO00198 91 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 PRKYO43930 277 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 EPPINO95925 133 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 TGM4P49221 684 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 CSNK1EP49674 416 aaKnown RBP12.99□□□□□ -0.33
TRIM4-201ENST00000349062 EIF2B5Q13144 721 aaKnown RBP12.99□□□□□ -0.33
TRIM4-201ENST00000349062 ZFP69Q49AA0 526 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 CAMKVQ8NCB2 501 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 OR56A1Q8NGH5 318 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 UBASH3BQ8TF42 649 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 TMEM255BQ8WV15 326 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 ZFPM2Q8WW38 1151 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 EFHD2Q96C19 240 aaPredicted RBP12.99□□□□□ -0.33
TRIM4-201ENST00000349062 SLC38A1Q9H2H9 487 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 QPCTLQ9NXS2 382 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 DAPP1Q9UN19 280 aa12.99□□□□□ -0.33
TRIM4-201ENST00000349062 GXYLT2A0PJZ3 443 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 APBB3O95704 486 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 ADORA3P0DMS8 318 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 STX4Q12846 297 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 ARMC4Q5T2S8 1044 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 GDPD3Q7L5L3 318 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 LHFPL3Q86UP9 236 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 CADM2Q8N3J6 435 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 OR4N2Q8NGD1 307 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 SLC38A4Q969I6 547 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 CCNB1IP1Q9NPC3 277 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 PLSCR3Q9NRY6 295 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 ATG2AQ2TAZ0 1938 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 A0A087WUU8 490 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 AGAP5A6NIR3 686 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 PRAMEF26H0Y7S4 382 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 CT62P0C5K7 136 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 OSMP13725 252 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 GNSP15586 552 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 GSTM5P46439 218 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 ANXA11P50995 505 aaKnown RBP12.98□□□□□ -0.33
TRIM4-201ENST00000349062 CCR4P51679 360 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 MINDY4Q4G0A6 757 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 USP30Q70CQ3 517 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 ABHD13Q7L211 337 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 SMAP2Q8WU79 429 aaPredicted RBP12.98□□□□□ -0.33
TRIM4-201ENST00000349062 MSLNLQ96KJ4 702 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 NECTIN4Q96NY8 510 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 TMEM246Q9BRR3 403 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 TSSK6Q9BXA6 273 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 GABARAPL3Q9BY60 117 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 FBXO8Q9NRD0 319 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 PAQR5Q9NXK6 330 aaPredicted RBP12.98□□□□□ -0.33
TRIM4-201ENST00000349062 NLGN3Q9NZ94 848 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 ADAM29Q9UKF5 820 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 N6AMT1Q9Y5N5 214 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 CSNK1G3Q9Y6M4 447 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 SPACA6W5XKT8 324 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 HOXD11P31277 338 aaPredicted RBP12.98□□□□□ -0.33
TRIM4-201ENST00000349062 GFERP55789 205 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 KIAA1024LP59773 190 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 TNFRSF17Q02223 184 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 RPL6Q02878 288 aaKnown RBP12.98□□□□□ -0.33
TRIM4-201ENST00000349062 FZD2Q14332 565 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 NDUFAF6Q330K2 333 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 LIPKQ5VXJ0 399 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 POMZP3Q6PJE2 187 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 YIPF6Q96EC8 236 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 SLC7A7Q9UM01 511 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 WBP11Q9Y2W2 641 aaKnown RBP12.98□□□□□ -0.33
TRIM4-201ENST00000349062 GPR179Q6PRD1 2367 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 MED12Q93074 2177 aa12.98□□□□□ -0.33
TRIM4-201ENST00000349062 TNRC18O15417 2968 aaPredicted RBP12.98□□□□□ -0.33
TRIM4-201ENST00000349062 ZC3H12DA2A288 527 aaKnown RBP12.97□□□□□ -0.33
TRIM4-201ENST00000349062 ZIC2O95409 532 aaPredicted RBP12.97□□□□□ -0.33
TRIM4-201ENST00000349062 SLC2A10O95528 541 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 CDK1P06493 297 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 SSTR4P31391 388 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 IFNA8P32881 189 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 RPS7P62081 194 aaKnown RBP12.97□□□□□ -0.33
TRIM4-201ENST00000349062 BTG2P78543 158 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 CCINQ13939 588 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 GAS6Q14393 721 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 ZNF267Q14586 743 aaPredicted RBP12.97□□□□□ -0.33
TRIM4-201ENST00000349062 KIR2DS3Q14952 304 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 MAPK14Q16539 360 aa12.97□□□□□ -0.33
TRIM4-201ENST00000349062 NDUFA5Q16718 116 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms