RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 ZFAND3Q9H8U3 227 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 SH2D2AQ9NP31 389 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 GID8Q9NWU2 228 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 KLRF1Q9NZS2 232 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 B4GALT7Q9UBV7 327 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.87□□□□□ -0.67
SNCA-202ENST00000345009 ABCG2Q9UNQ0 655 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 PCDHB14Q9Y5E9 798 aa10.87□□□□□ -0.67
SNCA-202ENST00000345009 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.87□□□□□ -0.67
SNCA-202ENST00000345009 ZNF462Q96JM2 2506 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 LOC100653049A0A140TA62 436 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 GXYLT2A0PJZ3 443 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 PRAMEF25A6NGN4 478 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 H3BNH8 94 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 STX11O75558 287 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 KRT34O76011 436 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 CCL3P10147 92 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 ZNF24P17028 368 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 ELAVL4P26378 380 aaKnown RBP10.86□□□□□ -0.67
SNCA-202ENST00000345009 CASP3P42574 277 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 MASP1P48740 699 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 MAN2A2P49641 1150 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 MEOX1P50221 254 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 RPS26P62854 115 aaKnown RBP10.86□□□□□ -0.67
SNCA-202ENST00000345009 ALDH6A1Q02252 535 aaKnown RBP10.86□□□□□ -0.67
SNCA-202ENST00000345009 FADDQ13158 208 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 NFYCQ13952 458 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 EXOSC6Q5RKV6 272 aaKnown RBP10.86□□□□□ -0.67
SNCA-202ENST00000345009 DCST2Q5T1A1 773 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 LRIF1Q5T3J3 769 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 TNFAIP8L2Q6P589 184 aaPredicted RBP10.86□□□□□ -0.67
SNCA-202ENST00000345009 DHDDSQ86SQ9 333 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 CLEC4FQ8N1N0 589 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 ZFP62Q8NB50 900 aaPredicted RBP10.86□□□□□ -0.67
SNCA-202ENST00000345009 CCDC197Q8NCU1 140 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 OR2M7Q8NG81 312 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 OR52N2Q8NGI0 321 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 FAM110BQ8TC76 370 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 CPT1CQ8TCG5 803 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 FAR1Q8WVX9 515 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 PMM1Q92871 262 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 HGDQ93099 445 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 ITPKCQ96DU7 683 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 ANGPTL4Q9BY76 406 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 HES7Q9BYE0 225 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 TBL1XR1Q9BZK7 514 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 PAIP1Q9H074 479 aaKnown RBP10.86□□□□□ -0.67
SNCA-202ENST00000345009 CACYBPQ9HB71 228 aaKnown RBP10.86□□□□□ -0.67
SNCA-202ENST00000345009 ZFP64Q9NPA5 681 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 SLC52A3Q9NQ40 469 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 POLE3Q9NRF9 147 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 UBQLN4Q9NRR5 601 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 OLAHQ9NV23 265 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 CALML5Q9NZT1 146 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 ARMCX1Q9P291 453 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 CNOT11Q9UKZ1 510 aaKnown RBP10.86□□□□□ -0.67
SNCA-202ENST00000345009 NINQ8N4C6 2090 aa10.86□□□□□ -0.67
SNCA-202ENST00000345009 ASPDHA6ND91 283 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 SCDO00767 359 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 NDUFAB1O14561 156 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 TFECO14948 347 aaPredicted RBP10.85□□□□□ -0.67
SNCA-202ENST00000345009 SLC28A2O43868 658 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 UTS2O95399 124 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 PRB1P04280 392 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 NGFRP08138 427 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 GUSBP08236 651 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 OR12D1P0DN82 309 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 NR2F1P10589 423 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 CYP4B1P13584 511 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 GPR85P60893 370 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 ARHGAP11BQ3KRB8 267 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 KRTCAP3Q53RY4 240 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 PAGE3Q5JUK9 113 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 PRAMEF20Q5VT98 475 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 FIGNL1Q6PIW4 674 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 BNC2Q6ZN30 1099 aaPredicted RBP10.85□□□□□ -0.67
SNCA-202ENST00000345009 ZNF605Q86T29 641 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 SNX32Q86XE0 403 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 CHDHQ8NE62 594 aaPredicted RBP10.85□□□□□ -0.67
SNCA-202ENST00000345009 OR5D16Q8NGK9 328 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 GRHL3Q8TE85 626 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 OIT3Q8WWZ8 545 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 SNRNP40Q96DI7 357 aaKnown RBP10.85□□□□□ -0.67
SNCA-202ENST00000345009 ZNF597Q96LX8 424 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 JSRP1Q96MG2 331 aaPredicted RBP10.85□□□□□ -0.67
SNCA-202ENST00000345009 TRNT1Q96Q11 434 aaKnown RBP10.85□□□□□ -0.67
SNCA-202ENST00000345009 OCSTAMPQ9BR26 566 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 THUMPD3Q9BV44 507 aaKnown RBP10.85□□□□□ -0.67
SNCA-202ENST00000345009 OSBPL11Q9BXB4 747 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 EFCAB1Q9HAE3 211 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 IL1RL2Q9HB29 575 aa10.85□□□□□ -0.67
SNCA-202ENST00000345009 RALYQ9UKM9 306 aaKnown RBP10.85□□□□□ -0.67
SNCA-202ENST00000345009 G3V3Y1 287 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 MRASO14807 208 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 ICOSLGO75144 302 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 COX4I1P13073 169 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 TBXA2RP21731 343 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 PTPN6P29350 595 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 PRDX6P30041 224 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 EVI2BP34910 448 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms