RNA–Protein interactions for RNA: ENST00000344749.9

TCF3-202, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-202ENST00000344749 TIMM29Q9BSF4 260 aa12.29□□□□□ -0.44
TCF3-202ENST00000344749 CENPOQ9BU64 300 aa12.29□□□□□ -0.44
TCF3-202ENST00000344749 GTPBP2Q9BX10 602 aaKnown RBP12.29□□□□□ -0.44
TCF3-202ENST00000344749 DDX31Q9H8H2 851 aaKnown RBP12.29□□□□□ -0.44
TCF3-202ENST00000344749 TBCCD1Q9NVR7 557 aa12.29□□□□□ -0.44
TCF3-202ENST00000344749 SLC16A6O15403 523 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 HOXC11O43248 304 aaPredicted RBP12.28□□□□□ -0.44
TCF3-202ENST00000344749 KLHL18O94889 574 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 NUP62P37198 522 aaPredicted RBP12.28□□□□□ -0.44
TCF3-202ENST00000344749 BCL6P41182 706 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 WNT4P56705 351 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 ENTPD8Q5MY95 495 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 ATCAYQ86WG3 371 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 SLC16A11Q8NCK7 471 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 HRASLS5Q96KN8 279 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 MBOAT4Q96T53 435 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 SAGE1Q9NXZ1 904 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 ASIC5Q9NY37 505 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 ATXN7L1Q9ULK2 861 aaPredicted RBP12.28□□□□□ -0.44
TCF3-202ENST00000344749 LCMT2O60294 686 aaKnown RBP12.28□□□□□ -0.44
TCF3-202ENST00000344749 CDC40O60508 579 aaKnown RBP eCLIP12.28□□□□□ -0.448e-7■□□□□ 10.2
TCF3-202ENST00000344749 TACSTD2P09758 323 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 EIF4EBP2Q13542 120 aaPredicted RBP12.28□□□□□ -0.44
TCF3-202ENST00000344749 GAS6Q14393 721 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 NDUFA5Q16718 116 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 BCL7AQ4VC05 210 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 METRNLQ641Q3 311 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 KDM4DQ6B0I6 523 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 CDRT4Q8N9R6 151 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 AMDHD1Q96NU7 426 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 SERINC2Q96SA4 455 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 GINS4Q9BRT9 223 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 PBX4Q9BYU1 374 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 B3GNT4Q9C0J1 378 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 EXO5Q9H790 373 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 NANSQ9NR45 359 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 ACSS1Q9NUB1 689 aaPredicted RBP12.28□□□□□ -0.44
TCF3-202ENST00000344749 COMMD9Q9P000 198 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 SPAG17Q6Q759 2223 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 TRAV27A0A087WT01 109 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 GXYLT2A0PJZ3 443 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 FLRT2O43155 660 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 EEF1E1O43324 174 aaKnown RBP12.28□□□□□ -0.44
TCF3-202ENST00000344749 RNF13O43567 381 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 ITGA10O75578 1167 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 AHSA1O95433 338 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 PROS1P07225 676 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 GP1BBP13224 206 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 TGFBR1P36897 503 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 LIPAP38571 399 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 TBCEQ15813 527 aaPredicted RBP12.28□□□□□ -0.44
TCF3-202ENST00000344749 LILRA6Q6PI73 481 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 UBE2Q1Q7Z7E8 422 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 MSRB3Q8IXL7 192 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 JAGN1Q8N5M9 183 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 NR4A3Q92570 626 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 SGTBQ96EQ0 304 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 NRTNQ99748 197 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 PINK1Q9BXM7 581 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 MKRN2Q9H000 416 aaKnown RBP12.28□□□□□ -0.44
TCF3-202ENST00000344749 ERVK-19Q9WJR5 959 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 TRPM6Q9BX84 2022 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 TRBV2A0A0J9YWF9 115 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 FAUP35544 74 aaKnown RBP12.28□□□□□ -0.44
TCF3-202ENST00000344749 SLC19A1P41440 591 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 KIR2DS3Q14952 304 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 SHHQ15465 462 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 NSDHLQ15738 373 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 ADPRMQ3LIE5 342 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 KRT77Q7Z794 578 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 PTOV1Q86YD1 416 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 RASGRP3Q8IV61 690 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 SLC37A3Q8NCC5 494 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 CCL4L1Q8NHW4 92 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 TMEM239Q8WW34 195 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 EPHX3Q9H6B9 360 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 LAMP5Q9UJQ1 280 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 SH2B3Q9UQQ2 575 aa12.28□□□□□ -0.44
TCF3-202ENST00000344749 PRODHO43272 600 aa12.27□□□□□ -0.44
TCF3-202ENST00000344749 IFNA6P05013 189 aa12.27□□□□□ -0.44
TCF3-202ENST00000344749 ZNF24P17028 368 aa12.27□□□□□ -0.44
TCF3-202ENST00000344749 ITGB8P26012 769 aa12.27□□□□□ -0.44
TCF3-202ENST00000344749 MAT1AQ00266 395 aaKnown RBP12.27□□□□□ -0.44
TCF3-202ENST00000344749 PUS10Q3MIT2 529 aaKnown RBP12.27□□□□□ -0.44
TCF3-202ENST00000344749 ZNF627Q7L945 461 aa12.27□□□□□ -0.44
TCF3-202ENST00000344749 RIMKLAQ8IXN7 391 aa12.27□□□□□ -0.44
TCF3-202ENST00000344749 OR2L8Q8NGY9 312 aa12.27□□□□□ -0.44
TCF3-202ENST00000344749 MED20Q9H944 212 aa12.27□□□□□ -0.44
TCF3-202ENST00000344749 GPN2Q9H9Y4 310 aaPredicted RBP12.27□□□□□ -0.44
TCF3-202ENST00000344749 PLEKHA1Q9HB21 404 aa12.27□□□□□ -0.44
TCF3-202ENST00000344749 MRPL15Q9P015 296 aaKnown RBP12.27□□□□□ -0.44
TCF3-202ENST00000344749 NLKQ9UBE8 527 aa12.27□□□□□ -0.44
TCF3-202ENST00000344749 CDC14CA4D256 554 aa12.27□□□□□ -0.45
TCF3-202ENST00000344749 A8MVJ9 347 aa12.27□□□□□ -0.45
TCF3-202ENST00000344749 ZNF670-ZNF695F2Z2N8 137 aa12.27□□□□□ -0.45
TCF3-202ENST00000344749 KCNJ13O60928 360 aa12.27□□□□□ -0.45
TCF3-202ENST00000344749 PBX2P40425 430 aa12.27□□□□□ -0.45
TCF3-202ENST00000344749 AKR1D1P51857 326 aa12.27□□□□□ -0.45
TCF3-202ENST00000344749 PPP3R1P63098 170 aa12.27□□□□□ -0.45
TCF3-202ENST00000344749 RELAQ04206 551 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms