RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 H3BSH0 61 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 PEX14O75381 377 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 EEDO75530 441 aaKnown RBP12.01□□□□□ -0.49
LIN54-201ENST00000340417 TEAD1P28347 426 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 STAT5AP42229 794 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 DAP3P51398 398 aaKnown RBP12.01□□□□□ -0.49
LIN54-201ENST00000340417 FOXA1P55317 472 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 DMPKQ09013 629 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 C9orf135Q5VTT2 229 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 NDUFAF7Q7L592 441 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 SARAFQ96BY9 339 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 OR7D2Q96RA2 312 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 DSN1Q9H410 356 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 PNPLA3Q9NST1 481 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 PARPBPQ9NWS1 579 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 PLSCR5A0PG75 271 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 PRAMEF25A6NGN4 478 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 FIGNL2A6NMB9 653 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 FTH1P19P0C7X4 201 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 LIM2P55344 173 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 CTXN1P60606 82 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 PSPHP78330 225 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 RIPK1Q13546 671 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 RAB39AQ14964 217 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 ABHD17CQ6PCB6 329 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 ASB9Q96DX5 294 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 ZC3HAV1LQ96H79 300 aaKnown RBP12.01□□□□□ -0.49
LIN54-201ENST00000340417 TM9SF2Q99805 663 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 MARCH7Q9H992 704 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 CALHM2Q9HA72 323 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 CLK4Q9HAZ1 481 aaKnown RBP12.01□□□□□ -0.49
LIN54-201ENST00000340417 OTOL1A6NHN0 477 aaPredicted RBP12.01□□□□□ -0.49
LIN54-201ENST00000340417 APOC1P02654 83 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 DBTP11182 482 aaKnown RBP12.01□□□□□ -0.49
LIN54-201ENST00000340417 UQCRC1P31930 480 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 MLLT10P55197 1068 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 GMFBP60983 142 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 LYRM4Q9HD34 91 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 PCDHB16Q9NRJ7 776 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 CARD8Q9Y2G2 431 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 IL2RAP01589 272 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 MELKQ14680 651 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 SLC10A1Q14973 349 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 RSPO4Q2I0M5 234 aaPredicted RBP12.01□□□□□ -0.49
LIN54-201ENST00000340417 SWT1Q5T5J6 900 aaKnown RBP12.01□□□□□ -0.49
LIN54-201ENST00000340417 ZNF101Q8IZC7 436 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 EXD3Q8N9H8 876 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 P2RY12Q9H244 342 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 OR51B6Q9H340 312 aa12.01□□□□□ -0.49
LIN54-201ENST00000340417 CRNNQ9UBG3 495 aaPredicted RBP12.01□□□□□ -0.49
LIN54-201ENST00000340417 NOSIPQ9Y314 301 aaKnown RBP12.01□□□□□ -0.49
LIN54-201ENST00000340417 J3QLW9 94 aa12□□□□□ -0.49
LIN54-201ENST00000340417 FAAHO00519 579 aa12□□□□□ -0.49
LIN54-201ENST00000340417 HTR1AP08908 422 aa12□□□□□ -0.49
LIN54-201ENST00000340417 GKN3PP0CG01 181 aa12□□□□□ -0.49
LIN54-201ENST00000340417 SFTPCP11686 197 aa12□□□□□ -0.49
LIN54-201ENST00000340417 ZNF19P17023 458 aa12□□□□□ -0.49
LIN54-201ENST00000340417 CARD18P57730 90 aa12□□□□□ -0.49
LIN54-201ENST00000340417 LPCAT4Q643R3 524 aa12□□□□□ -0.49
LIN54-201ENST00000340417 ZER1Q7Z7L7 766 aa12□□□□□ -0.49
LIN54-201ENST00000340417 GUCD1Q96NT3 240 aa12□□□□□ -0.49
LIN54-201ENST00000340417 PIP5K1AQ99755 562 aa12□□□□□ -0.49
LIN54-201ENST00000340417 INPP5KQ9BT40 448 aa12□□□□□ -0.49
LIN54-201ENST00000340417 TSPAN10Q9H1Z9 355 aaPredicted RBP12□□□□□ -0.49
LIN54-201ENST00000340417 ACTR3BQ9P1U1 418 aa12□□□□□ -0.49
LIN54-201ENST00000340417 OR51B4Q9Y5P0 310 aa12□□□□□ -0.49
LIN54-201ENST00000340417 LOC105369274A0A096LPK9 316 aa12□□□□□ -0.49
LIN54-201ENST00000340417 NELFEP18615 380 aaKnown RBP12□□□□□ -0.49
LIN54-201ENST00000340417 CBX5P45973 191 aa12□□□□□ -0.49
LIN54-201ENST00000340417 CDH11P55287 796 aa12□□□□□ -0.49
LIN54-201ENST00000340417 PPP1R8Q12972 351 aaKnown RBP12□□□□□ -0.49
LIN54-201ENST00000340417 VHLLQ6RSH7 139 aa12□□□□□ -0.49
LIN54-201ENST00000340417 OR4N4Q8N0Y3 316 aa12□□□□□ -0.49
LIN54-201ENST00000340417 POMPQ9Y244 141 aa12□□□□□ -0.49
LIN54-201ENST00000340417 PDCD5O14737 125 aa12□□□□□ -0.49
LIN54-201ENST00000340417 B3GALT4O96024 378 aa12□□□□□ -0.49
LIN54-201ENST00000340417 FPR1P21462 350 aa12□□□□□ -0.49
LIN54-201ENST00000340417 TSFMP43897 325 aaKnown RBP12□□□□□ -0.49
LIN54-201ENST00000340417 SCN1BQ07699 218 aa12□□□□□ -0.49
LIN54-201ENST00000340417 CCDC103Q8IW40 242 aa12□□□□□ -0.49
LIN54-201ENST00000340417 OR2T33Q8NG76 320 aa12□□□□□ -0.49
LIN54-201ENST00000340417 UFD1Q92890 307 aa12□□□□□ -0.49
LIN54-201ENST00000340417 DICER1Q9UPY3 1922 aaKnown RBP12□□□□□ -0.49
LIN54-201ENST00000340417 GXYLT2A0PJZ3 443 aa12□□□□□ -0.49
LIN54-201ENST00000340417 TLX2O43763 284 aaPredicted RBP12□□□□□ -0.49
LIN54-201ENST00000340417 FGF4P08620 206 aa12□□□□□ -0.49
LIN54-201ENST00000340417 HOXC4P09017 264 aaPredicted RBP12□□□□□ -0.49
LIN54-201ENST00000340417 ZSWIM9Q86XI8 627 aa12□□□□□ -0.49
LIN54-201ENST00000340417 GPBAR1Q8TDU6 330 aa12□□□□□ -0.49
LIN54-201ENST00000340417 MAL2Q969L2 176 aa12□□□□□ -0.49
LIN54-201ENST00000340417 SENP5Q96HI0 755 aaPredicted RBP12□□□□□ -0.49
LIN54-201ENST00000340417 ZNF419Q96HQ0 510 aaPredicted RBP12□□□□□ -0.49
LIN54-201ENST00000340417 C2orf42Q9NWW7 574 aa12□□□□□ -0.49
LIN54-201ENST00000340417 ZNFX1Q9P2E3 1918 aaKnown RBP12□□□□□ -0.49
LIN54-201ENST00000340417 TSPAN11A1L157 253 aa12□□□□□ -0.49
LIN54-201ENST00000340417 HTR3EA5X5Y0 456 aa12□□□□□ -0.49
LIN54-201ENST00000340417 SSTR4P31391 388 aa12□□□□□ -0.49
LIN54-201ENST00000340417 ACVR1BP36896 505 aa12□□□□□ -0.49
LIN54-201ENST00000340417 RGNQ15493 299 aa12□□□□□ -0.49
LIN54-201ENST00000340417 CEP78Q5JTW2 689 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms