RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 TRIP6Q15654 476 aaKnown RBP6.64□□□□□ -1.35
NUP43-201ENST00000340413 SYPL1Q16563 259 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 TMEM44Q2T9K0 475 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 KLHL26Q53HC5 615 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 CT45A2Q5DJT8 189 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 SLC25A30Q5SVS4 291 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 RAB43Q86YS6 212 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 ELP5Q8TE02 316 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 GIPC3Q8TF64 312 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 ADAMTS14Q8WXS8 1223 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 KAT2AQ92830 837 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 ATOH1Q92858 354 aaPredicted RBP6.64□□□□□ -1.35
NUP43-201ENST00000340413 COL21A1Q96P44 957 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 LPAR4Q99677 370 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 ZNF696Q9H7X3 374 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 COQ10BQ9H8M1 238 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 CPNE5Q9HCH3 593 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 OCIAD1Q9NX40 245 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 GMPR2Q9P2T1 348 aaKnown RBP6.64□□□□□ -1.35
NUP43-201ENST00000340413 GNGT2O14610 69 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 SLC30A4O14863 429 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 TM4SF5O14894 197 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 CSO75390 466 aaKnown RBP6.64□□□□□ -1.35
NUP43-201ENST00000340413 ZFAND5O76080 213 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 CCNB2O95067 398 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 H1F0P07305 194 aaKnown RBP6.64□□□□□ -1.35
NUP43-201ENST00000340413 CTSBP07858 339 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 CBLP22681 906 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 MMP11P24347 488 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 RRM2P31350 389 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 FOLR3P41439 243 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 PPM1FP49593 454 aaPredicted RBP6.64□□□□□ -1.35
NUP43-201ENST00000340413 SLC26A5P58743 744 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 SNRPNP63162 240 aaKnown RBP6.64□□□□□ -1.35
NUP43-201ENST00000340413 MED21Q13503 144 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 KCTD21Q4G0X4 260 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 RAB11FIP2Q7L804 512 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 TSEN54Q7Z6J9 526 aaKnown RBP6.64□□□□□ -1.35
NUP43-201ENST00000340413 SLC16A11Q8NCK7 471 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 C16orf52Q8NHV5 167 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 SLC22A8Q8TCC7 542 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 LIPHQ8WWY8 451 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 COL25A1Q9BXS0 654 aaPredicted RBP6.64□□□□□ -1.35
NUP43-201ENST00000340413 AMBRA1Q9C0C7 1298 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 NRSN2Q9GZP1 204 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 TMCC3Q9ULS5 477 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 TRIM64CA6NLI5 447 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 TNFRSF11BO00300 401 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 AP3D1O14617 1153 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 HTR3AP46098 478 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 MRPS35P82673 323 aaKnown RBP6.64□□□□□ -1.35
NUP43-201ENST00000340413 VLDLRP98155 873 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 GRAMD1BQ3KR37 738 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 GLYR1Q49A26 553 aaPredicted RBP6.64□□□□□ -1.35
NUP43-201ENST00000340413 ENTPD8Q5MY95 495 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 HLA-DQA1Q5Y7H0 255 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 LPCAT4Q643R3 524 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 ZNF770Q6IQ21 691 aaPredicted RBP6.64□□□□□ -1.35
NUP43-201ENST00000340413 NPSR1Q6W5P4 371 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 ZNF836Q6ZNA1 936 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 NDUFAF7Q7L592 441 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 EGFL6Q8IUX8 553 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 BCORP1Q8N888 145 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 ZNF555Q8NEP9 628 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 DNAJA4Q8WW22 397 aaPredicted RBP6.64□□□□□ -1.35
NUP43-201ENST00000340413 C16orf58Q96GQ5 468 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 SLC25A19Q9HC21 320 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 PARD6AQ9NPB6 346 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 PNPLA3Q9NST1 481 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 ACER3Q9NUN7 267 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 KLHL3Q9UH77 587 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 BAIAP2Q9UQB8 552 aa6.64□□□□□ -1.35
NUP43-201ENST00000340413 MAGEA13PA6NCF6 341 aa6.63□□□□□ -1.35
NUP43-201ENST00000340413 IDSB3KWA1 339 aa6.63□□□□□ -1.35
NUP43-201ENST00000340413 ALG1L2C9J202 215 aa6.63□□□□□ -1.35
NUP43-201ENST00000340413 TNNI3P19429 210 aa6.63□□□□□ -1.35
NUP43-201ENST00000340413 GABRA3P34903 492 aa6.63□□□□□ -1.35
NUP43-201ENST00000340413 TMED1Q13445 227 aa6.63□□□□□ -1.35
NUP43-201ENST00000340413 ZNF267Q14586 743 aaPredicted RBP6.63□□□□□ -1.35
NUP43-201ENST00000340413 PUM1Q14671 1186 aaKnown RBP eCLIP6.63□□□□□ -1.35
NUP43-201ENST00000340413 SFT2D3Q587I9 215 aa6.63□□□□□ -1.35
NUP43-201ENST00000340413 RBM48Q5RL73 367 aaKnown RBP6.63□□□□□ -1.35
NUP43-201ENST00000340413 LINC00114Q6XXX2 140 aa6.63□□□□□ -1.35
NUP43-201ENST00000340413 MRGPREQ86SM8 312 aa6.63□□□□□ -1.35
NUP43-201ENST00000340413 DHRSXQ8N5I4 330 aa6.63□□□□□ -1.35
NUP43-201ENST00000340413 GNPDA2Q8TDQ7 276 aa6.63□□□□□ -1.35
NUP43-201ENST00000340413 GPR151Q8TDV0 419 aa6.63□□□□□ -1.35
NUP43-201ENST00000340413 IMMP1LQ96LU5 166 aa6.63□□□□□ -1.35
NUP43-201ENST00000340413 SEPHS2Q99611 448 aa6.63□□□□□ -1.35
NUP43-201ENST00000340413 WDR77Q9BQA1 342 aaPredicted RBP6.63□□□□□ -1.35
NUP43-201ENST00000340413 YIPF2Q9BWQ6 316 aa6.63□□□□□ -1.35
NUP43-201ENST00000340413 PRRG3Q9BZD7 231 aa6.63□□□□□ -1.35
NUP43-201ENST00000340413 NDEL1Q9GZM8 345 aa6.63□□□□□ -1.35
NUP43-201ENST00000340413 FSCN3Q9NQT6 498 aa6.63□□□□□ -1.35
NUP43-201ENST00000340413 SDHAF3Q9NRP4 125 aa6.63□□□□□ -1.35
NUP43-201ENST00000340413 PADI1Q9ULC6 663 aa6.63□□□□□ -1.35
NUP43-201ENST00000340413 OAZ3Q9UMX2 235 aa6.63□□□□□ -1.35
NUP43-201ENST00000340413 A4GNTQ9UNA3 340 aa6.63□□□□□ -1.35
NUP43-201ENST00000340413 ERVK-19Q9WJR5 959 aa6.63□□□□□ -1.35
NUP43-201ENST00000340413 B3GALT1Q9Y5Z6 326 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms