RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 ICOSLGO75144 302 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 NGFRP08138 427 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 GUSBP08236 651 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 ETFAP13804 333 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 HOXB9P17482 250 aaPredicted RBP10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 ENDOUP21128 410 aaKnown RBP10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 TBXA2RP21731 343 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 MASP1P48740 699 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 MEOX1P50221 254 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 MVDP53602 400 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 GPR85P60893 370 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 HPCAP84074 193 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 PLGLB1Q02325 96 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 CAPRIN1Q14444 709 aaKnown RBP10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 KRT72Q14CN4 511 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 FLYWCH1Q4VC44 716 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 PRAMEF20Q5VT98 475 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 FAM91A1Q658Y4 838 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 DESI1Q6ICB0 168 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 NANOGP8Q6NSW7 305 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 FAM180AQ6UWF9 173 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 LRRC74BQ6ZQY2 392 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 MSRB3Q8IXL7 192 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 METTL25Q8N6Q8 603 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 Q8NA96 180 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 ZNF527Q8NB42 609 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 OR2M7Q8NG81 312 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 OR4C3Q8NH37 302 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 PMM1Q92871 262 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 RCN3Q96D15 328 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 DTNBP1Q96EV8 351 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 NSL1Q96IY1 281 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 OSBPL11Q9BXB4 747 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 TBL1XR1Q9BZK7 514 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 MTHFD2LQ9H903 347 aaPredicted RBP10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 NANOGQ9H9S0 305 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 AGPAT4Q9NRZ5 378 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 FBXO34Q9NWN3 711 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 P2RX2Q9UBL9 471 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 TAGLN3Q9UI15 199 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 BOKQ9UMX3 212 aaPredicted RBP10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 ABCG2Q9UNQ0 655 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 WDR45Q9Y484 360 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 CACNA1GO43497 2377 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 MGAQ8IWI9 3026 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 C5orf58C9J3I9 102 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 H3BNH8 94 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 SUV39H1O43463 412 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 SLC28A2O43868 658 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 SORBS2O94875 1100 aaKnown RBP10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 C1QCP02747 245 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 TFPTP0C1Z6 253 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 ESRRAP11474 423 aaPredicted RBP10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 BMP2P12643 396 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 EVI2BP34910 448 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 DNASE1L1P49184 302 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 ATP12AP54707 1039 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 ALDH6A1Q02252 535 aaKnown RBP10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 INPP5JQ15735 1006 aaPredicted RBP10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 GPR68Q15743 365 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 GRAMD1BQ3KR37 738 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 COLEC12Q5KU26 742 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 GCNT6Q5T4J0 391 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 AP1ARQ63HQ0 302 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 HACD2Q6Y1H2 254 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 GALNT10Q86SR1 603 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 FITM2Q8N6M3 262 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 ZFP62Q8NB50 900 aaPredicted RBP10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 OR8J3Q8NGG0 315 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 GRHL3Q8TE85 626 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 JSRP1Q96MG2 331 aaPredicted RBP10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 ECSITQ9BQ95 431 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 CPPED1Q9BRF8 314 aaPredicted RBP10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 CACYBPQ9HB71 228 aaKnown RBP10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 PROK2Q9HC23 129 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 ZFP64Q9NPA5 681 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 DEPPQ9NTK1 212 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 TUBA8Q9NY65 449 aaPredicted RBP10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 MKLN1Q9UL63 735 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 L3MBTL1Q9Y468 752 aa10.91□□□□□ -0.66
SPTLC1-202ENST00000337841 C15orf38-AP3S2A0A0A6YYH1 394 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 A0A0G2JPF8 293 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 HNRNPCL2B2RXH8 293 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 HNRNPCL3B7ZW38 293 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 ACOT7O00154 380 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 GTPBP1O00178 669 aaKnown RBP10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 NDUFB5O43674 189 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 FCMRO60667 390 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 HNRNPCL1O60812 293 aaKnown RBP10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 TRIM3O75382 744 aaPredicted RBP10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 TNFRSF21O75509 655 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 H6PDO95479 791 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 OXSR1O95747 527 aaPredicted RBP10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 HNRNPCL4P0DMR1 293 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 ELAVL4P26378 380 aaKnown RBP10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 DCTP40126 519 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 NUDT2P50583 147 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 CRISP3P54108 245 aa10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 PPIAP62937 165 aaKnown RBP10.9□□□□□ -0.66
SPTLC1-202ENST00000337841 CHRNEQ04844 493 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms