RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 ZBED6CLQ96FA7 236 aaPredicted RBP9.5□□□□□ -0.89
HIF1A-202ENST00000337138 ZNF582Q96NG8 517 aaPredicted RBP9.5□□□□□ -0.89
HIF1A-202ENST00000337138 QRFPRQ96P65 431 aa9.5□□□□□ -0.89
HIF1A-202ENST00000337138 DCLRE1CQ96SD1 692 aaKnown RBP9.5□□□□□ -0.89
HIF1A-202ENST00000337138 AIF1LQ9BQI0 150 aa9.5□□□□□ -0.89
HIF1A-202ENST00000337138 SAP130Q9H0E3 1048 aa9.5□□□□□ -0.89
HIF1A-202ENST00000337138 TMEM138Q9NPI0 162 aa9.5□□□□□ -0.89
HIF1A-202ENST00000337138 PAK6Q9NQU5 681 aaPredicted RBP9.5□□□□□ -0.89
HIF1A-202ENST00000337138 PCDHGB2Q9Y5G2 931 aa9.5□□□□□ -0.89
HIF1A-202ENST00000337138 SYPP08247 313 aa9.5□□□□□ -0.89
HIF1A-202ENST00000337138 ALAS2P22557 587 aa9.5□□□□□ -0.89
HIF1A-202ENST00000337138 AHRP35869 848 aa9.5□□□□□ -0.89
HIF1A-202ENST00000337138 SLC7A9P82251 487 aa9.5□□□□□ -0.89
HIF1A-202ENST00000337138 SNTA1Q13424 505 aa9.5□□□□□ -0.89
HIF1A-202ENST00000337138 GLYR1Q49A26 553 aaPredicted RBP9.5□□□□□ -0.89
HIF1A-202ENST00000337138 TCEAL5Q5H9L2 206 aa9.5□□□□□ -0.89
HIF1A-202ENST00000337138 ZNF311Q5JNZ3 666 aa9.5□□□□□ -0.89
HIF1A-202ENST00000337138 SLC9B2Q86UD5 537 aa9.5□□□□□ -0.89
HIF1A-202ENST00000337138 VRK2Q86Y07 508 aa9.5□□□□□ -0.89
HIF1A-202ENST00000337138 NANOGP1Q8N7R0 232 aa9.5□□□□□ -0.89
HIF1A-202ENST00000337138 FBXO15Q8NCQ5 510 aaPredicted RBP9.5□□□□□ -0.89
HIF1A-202ENST00000337138 BBS1Q8NFJ9 593 aa9.5□□□□□ -0.89
HIF1A-202ENST00000337138 VN1R2Q8NFZ6 395 aa9.5□□□□□ -0.89
HIF1A-202ENST00000337138 SETD6Q8TBK2 473 aa9.5□□□□□ -0.89
HIF1A-202ENST00000337138 RAD51AP1Q96B01 352 aa9.5□□□□□ -0.89
HIF1A-202ENST00000337138 KATNB1Q9BVA0 655 aa9.5□□□□□ -0.89
HIF1A-202ENST00000337138 MIXL1Q9H2W2 232 aa9.5□□□□□ -0.89
HIF1A-202ENST00000337138 TDP1Q9NUW8 608 aa9.5□□□□□ -0.89
HIF1A-202ENST00000337138 P2RX2Q9UBL9 471 aa9.5□□□□□ -0.89
HIF1A-202ENST00000337138 PCYT1BQ9Y5K3 369 aaPredicted RBP9.5□□□□□ -0.89
HIF1A-202ENST00000337138 CFAP54Q96N23 3096 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 ATG2BQ96BY7 2078 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 HYKKA2RU49 373 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 FAAHO00519 579 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 PGRMC2O15173 223 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 TMPRSS11DO60235 418 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 PAHP00439 452 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 PIPP12273 146 aaPredicted RBP9.49□□□□□ -0.89
HIF1A-202ENST00000337138 ACVR1BP36896 505 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 WNT4P56705 351 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 RGS8P57771 180 aaPredicted RBP9.49□□□□□ -0.89
HIF1A-202ENST00000337138 VSX2P58304 361 aaPredicted RBP9.49□□□□□ -0.89
HIF1A-202ENST00000337138 HSF2Q03933 536 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 KCNC3Q14003 757 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 SYT9Q86SS6 491 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 ANKK1Q8NFD2 765 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 CREB3L4Q8TEY5 395 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 NUS1Q96E22 293 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 UBQLN2Q9UHD9 624 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 ICKQ9UPZ9 632 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 OR1A2Q9Y585 309 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 HMGN4O00479 90 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 SMAD9O15198 467 aaKnown RBP9.49□□□□□ -0.89
HIF1A-202ENST00000337138 MOSPD3O75425 235 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 HMGN2P05204 90 aaKnown RBP9.49□□□□□ -0.89
HIF1A-202ENST00000337138 ERGP11308 486 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 ANXA3P12429 323 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 PUDPQ08623 228 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 MESP2Q0VG99 397 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 RAB33AQ14088 237 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 ZNF805Q5CZA5 627 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 SLC25A30Q5SVS4 291 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 XKRXQ6PP77 449 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 MRGPREQ86SM8 312 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 METTL3Q86U44 580 aaKnown RBP9.49□□□□□ -0.89
HIF1A-202ENST00000337138 ADIPOR2Q86V24 386 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 SAMD12Q8N8I0 201 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 PROKR2Q8NFJ6 384 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 OR2T35Q8NGX2 323 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 DPH7Q9BTV6 452 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 AICDAQ9GZX7 198 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 TWSG1Q9GZX9 223 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 SPHK2Q9NRA0 654 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 ATPIF1Q9UII2 106 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 MAB21L2Q9Y586 359 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 KCNE3Q9Y6H6 103 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 FGBP02675 491 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 MSL3P1P0C860 447 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 UBL4AP11441 157 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 ZNF30P17039 623 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 NTSP30990 170 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 NUP62P37198 522 aaPredicted RBP9.49□□□□□ -0.89
HIF1A-202ENST00000337138 FNTBP49356 437 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 SRP9P49458 86 aaKnown RBP9.49□□□□□ -0.89
HIF1A-202ENST00000337138 VASPP50552 380 aaPredicted RBP9.49□□□□□ -0.89
HIF1A-202ENST00000337138 HYAL2Q12891 473 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 NDUFAF5Q5TEU4 345 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 KHDRBS2Q5VWX1 349 aaKnown RBP9.49□□□□□ -0.89
HIF1A-202ENST00000337138 SLC27A4Q6P1M0 643 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.49□□□□□ -0.89
HIF1A-202ENST00000337138 AMZ2Q86W34 360 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 ADGRF3Q8IZF5 1079 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 FTMTQ8N4E7 242 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 SRFBP1Q8NEF9 429 aaKnown RBP9.49□□□□□ -0.89
HIF1A-202ENST00000337138 OR51L1Q8NGJ5 315 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 ZCCHC2Q9C0B9 1178 aaKnown RBP9.49□□□□□ -0.89
HIF1A-202ENST00000337138 C3orf14Q9HBI5 128 aa9.49□□□□□ -0.89
HIF1A-202ENST00000337138 TESQ9UGI8 421 aaKnown RBP9.49□□□□□ -0.89
HIF1A-202ENST00000337138 SF3B6Q9Y3B4 125 aaKnown RBP9.49□□□□□ -0.89
HIF1A-202ENST00000337138 MAGEB4O15481 346 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms