RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 PARP16Q8N5Y8 322 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 CYB561A3Q8NBI2 242 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 OR51A7Q8NH64 312 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 TEX47Q8TBZ9 253 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 PEX11GQ96HA9 241 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 FUZQ9BT04 418 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 ASPNQ9BXN1 380 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 NUAK2Q9H093 628 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 TBC1D17Q9HA65 648 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 SLC25A19Q9HC21 320 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 FBXL4Q9UKA2 621 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 TRAV27A0A087WT01 109 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 A0A1W2PRQ8 180 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 A6NCN8 305 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 EFCAB10A6NFE3 127 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 C17orf51A8MQB3 221 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 AP3D1O14617 1153 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 ADAM11O75078 769 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 HTR2AP28223 471 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 ATP6V1E1P36543 226 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 NKX2-5P52952 324 aaPredicted RBP8.25□□□□□ -1.09
SNCA-201ENST00000336904 RPS15AP62244 130 aaKnown RBP8.25□□□□□ -1.09
SNCA-201ENST00000336904 BTG2P78543 158 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 HHEXQ03014 270 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 KCNAB1Q14722 419 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 SNAP47Q5SQN1 464 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 MRPL2Q5T653 305 aaKnown RBP8.25□□□□□ -1.09
SNCA-201ENST00000336904 ABI3BPQ7Z7G0 1075 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 GATAD2AQ86YP4 633 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 CADM3Q8N126 398 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 CSNK1A1LQ8N752 337 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 COX18Q8N8Q8 333 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 OR51L1Q8NGJ5 315 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 SLC41A3Q96GZ6 507 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 TMEM80Q96HE8 168 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 LMF1Q96S06 567 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 ZFYVE21Q9BQ24 234 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 TMED9Q9BVK6 235 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 HCAR1Q9BXC0 346 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 CCDC86Q9H6F5 360 aaKnown RBP8.25□□□□□ -1.09
SNCA-201ENST00000336904 RMI1Q9H9A7 625 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 ABCB9Q9NP78 766 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 NLGN3Q9NZ94 848 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 ZNF443Q9Y2A4 671 aaPredicted RBP8.25□□□□□ -1.09
SNCA-201ENST00000336904 RBMX2Q9Y388 322 aaKnown RBP8.25□□□□□ -1.09
SNCA-201ENST00000336904 PCDHGA3Q9Y5H0 932 aa8.25□□□□□ -1.09
SNCA-201ENST00000336904 SLC9B1P1A6NJY1 282 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 SHISA7A6NL88 538 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 A8MUA0 341 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 TBX19O60806 448 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 CDRT1O95170 752 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 SERPINB1P30740 379 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 AKT2P31751 481 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 EIF2B5Q13144 721 aaKnown RBP8.24□□□□□ -1.09
SNCA-201ENST00000336904 FAM53BQ14153 422 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 ELOAQ14241 798 aaKnown RBP8.24□□□□□ -1.09
SNCA-201ENST00000336904 SUZ12Q15022 739 aaKnown RBP8.24□□□□□ -1.09
SNCA-201ENST00000336904 KLHL12Q53G59 568 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 MFSD4BQ5TF39 518 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 DESI1Q6ICB0 168 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 USP43Q70EL4 1123 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 SLC30A8Q8IWU4 369 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 OR8H2Q8N162 312 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 DIO2Q92813 273 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 HPS1Q92902 700 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 C1GALT1C1Q96EU7 318 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 CDCA3Q99618 268 aaPredicted RBP8.24□□□□□ -1.09
SNCA-201ENST00000336904 YIPF2Q9BWQ6 316 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 WDR12Q9GZL7 423 aaKnown RBP8.24□□□□□ -1.09
SNCA-201ENST00000336904 WSB2Q9NYS7 404 aaPredicted RBP8.24□□□□□ -1.09
SNCA-201ENST00000336904 ACAD8Q9UKU7 415 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 A0A0G2JPF8 293 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 HNRNPCL2B2RXH8 293 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 HNRNPCL3B7ZW38 293 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 GUCY1B2O75343 617 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 REM1O75628 298 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 SNX4O95219 450 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 HNRNPCL4P0DMR1 293 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 MAOAP21397 527 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 SLC9A3P48764 834 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 RELAQ04206 551 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 ZNF155Q12901 538 aaPredicted RBP8.24□□□□□ -1.09
SNCA-201ENST00000336904 LRIT3Q3SXY7 679 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 BHLHB9Q6PI77 547 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 OR51G2Q8NGK0 314 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 OR8J1Q8NGP2 316 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 OR13C2Q8NGS9 318 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 SDF2Q99470 211 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 NEURL2Q9BR09 285 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 PINK1Q9BXM7 581 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 HDHD5Q9BXW7 423 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 ZNF576Q9H609 170 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 TRIM45Q9H8W5 580 aaPredicted RBP8.24□□□□□ -1.09
SNCA-201ENST00000336904 PILRAQ9UKJ1 303 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 HEBP2Q9Y5Z4 205 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 A0A1B0GVC2 190 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 C2orf92A0A1B0GVN3 265 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 A6NIN4 97 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 AGAP5A6NIR3 686 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms