RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 NAGSQ8N159 534 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 RNF175Q8N4F7 328 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 C19orf47Q8N9M1 422 aaKnown RBP11.09□□□□□ -0.63
HDAC6-201ENST00000334136 WDR48Q8TAF3 677 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 NEIL3Q8TAT5 605 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 GATAD2BQ8WXI9 593 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 DGAT2Q96PD7 388 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 GAL3ST4Q96RP7 486 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 MAGIXQ9H6Y5 334 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 HCN3Q9P1Z3 774 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 EXTL2Q9UBQ6 330 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 ANAPC1Q9H1A4 1944 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 DNAH12Q6ZR08 3092 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 PEX12O00623 359 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 SRPX2O60687 465 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-201ENST00000334136 NPPBP16860 134 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 TGFBR1P36897 503 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 PIK3CBP42338 1070 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 HNRNPFP52597 415 aaKnown RBP11.09□□□□□ -0.63
HDAC6-201ENST00000334136 ID2Q02363 134 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 BTLAQ7Z6A9 289 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 PPP1R3BQ86XI6 285 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 PITHD1Q9GZP4 211 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-201ENST00000334136 PRTFDC1Q9NRG1 225 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 SLC39A1Q9NY26 324 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 IKZF2Q9UKS7 526 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 PCDHGA5Q9Y5G8 931 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 A0A1W2PPK0 400 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 PLD2O14939 933 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 CLEC3AO75596 197 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 SBK3P0C264 359 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 C8orf89P0DMQ9 161 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 MTHFD2P13995 350 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 CRISP1P54107 249 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 HYAL2Q12891 473 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 ZNF155Q12901 538 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-201ENST00000334136 SOWAHCQ53LP3 525 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-201ENST00000334136 AGAP7PQ5VUJ5 663 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 OR4C11Q6IEV9 310 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 SLCO4C1Q6ZQN7 724 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 NATD1Q8N6N6 113 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 SAMD12Q8N8I0 201 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 ZNF740Q8NDX6 193 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 ABCG5Q9H222 651 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 PPIL3Q9H2H8 161 aaKnown RBP11.09□□□□□ -0.63
HDAC6-201ENST00000334136 SEMA6CQ9H3T2 930 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 FGF21Q9NSA1 209 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 SPHK1Q9NYA1 384 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 TAS2R16Q9NYV7 291 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 NLGN3Q9NZ94 848 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 MEIOCA2RUB1 952 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 H0YGG7 62 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 H3BSH0 61 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 IFNA7P01567 189 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 ARF3P61204 181 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-201ENST00000334136 HSD11B2P80365 405 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 SIM1P81133 766 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-201ENST00000334136 BIKQ13323 160 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 FAM180AQ6UWF9 173 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 HSDL2Q6YN16 418 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 PIAS4Q8N2W9 510 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-201ENST00000334136 LILRB4Q8NHJ6 448 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 SNAPC3Q92966 411 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 LRR1Q96L50 414 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 ERMAPQ96PL5 475 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-201ENST00000334136 RBM38Q9H0Z9 239 aaKnown RBP11.09□□□□□ -0.63
HDAC6-201ENST00000334136 TNFRSF10DQ9UBN6 386 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 PPIEQ9UNP9 301 aaKnown RBP11.09□□□□□ -0.63
HDAC6-201ENST00000334136 SRPK3Q9UPE1 567 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 RNF215Q9Y6U7 377 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 MAU2Q9Y6X3 613 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 HSPE1-MOB4S4R3N1 261 aa11.09□□□□□ -0.63
HDAC6-201ENST00000334136 A0A1W2PQ09 198 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 TAPBPO15533 448 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 OR6A2O95222 327 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 HEXBP07686 556 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 CELA2BP08218 269 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-201ENST00000334136 TACR1P25103 407 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 TNFSF8P32971 234 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 SLC9A3P48764 834 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 SMSP52788 366 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 ADARB1P78563 741 aaKnown RBP11.08□□□□□ -0.64
HDAC6-201ENST00000334136 DEFA5Q01523 94 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 ZNF33BQ06732 778 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 FRRS1Q6ZNA5 592 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 KLHL36Q8N4N3 616 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 IQCF1Q8N6M8 205 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 GPR151Q8TDV0 419 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 DEDD2Q8WXF8 326 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 IFT27Q9BW83 186 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 GORASP2Q9H8Y8 452 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 ICKQ9UPZ9 632 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 GRIP1Q9Y3R0 1128 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 AP1M2Q9Y6Q5 423 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 COQ9O75208 318 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 TSPAN12O95859 305 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 STOMP27105 288 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 UQCRC1P31930 480 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 CRISP3P54108 245 aa11.08□□□□□ -0.64
HDAC6-201ENST00000334136 FGFBP1Q14512 234 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms