RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 TMEM150BA6NC51 233 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 GRM6O15303 877 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 FABP7O15540 132 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 GSRP00390 522 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 CBR1P16152 277 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 TSSK4Q6SA08 328 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 CYP2W1Q8TAV3 490 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 SLC39A7Q92504 469 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 RPL3LQ92901 407 aaKnown RBP9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 ZNF442Q9H7R0 627 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 CADP27708 2225 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 TSPAN11A1L157 253 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 GIPP09681 153 aaPredicted RBP9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 GGT1P19440 569 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 ZNF84P51523 738 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 FXYD4P59646 89 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 EMX1Q04741 257 aaPredicted RBP9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 KIAA1211LQ6NV74 962 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 LARP4Q71RC2 724 aaKnown RBP eCLIP9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 ZNF679Q8IYX0 411 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 MAP6Q96JE9 813 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 PORCNQ9H237 461 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 KCNH6Q9H252 994 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 IL21RQ9HBE5 538 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 ADAP2Q9NPF8 381 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 NOCTQ9UK39 431 aaKnown RBP9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 ANKUB1A6NFN9 424 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 ZNF736B4DX44 427 aaPredicted RBP9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 PRICKLE3O43900 615 aaPredicted RBP9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 MAS1P04201 325 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 RAB40BQ12829 278 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 PPP1R8Q12972 351 aaKnown RBP9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 DBF4BQ8NFT6 615 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 DNAJC5Q9H3Z4 198 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 RAI2Q9Y5P3 530 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 TRBC2A0A5B9 178 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 ZNF207O43670 478 aaKnown RBP9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 ECI2O75521 394 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 ADORA2AP29274 412 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 AKT1S1Q96B36 256 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 NCDNQ9UBB6 729 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 FBXO7Q9Y3I1 522 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 GTF3C1Q12789 2109 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 NUP188Q5SRE5 1749 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 FAM170BA6NMN3 283 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 A8MT66 165 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 TAF1AQ15573 450 aaPredicted RBP9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 ADGRG3Q86Y34 549 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 DNERQ8NFT8 737 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 DERL2Q9GZP9 239 aa9.84□□□□□ -0.83
SPTBN1-201ENST00000333896 GRXCR1A8MXD5 290 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 NPIPA2E9PIF3 369 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 NPIPA3F8WFD2 350 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 B4GALT4O60513 344 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 GABARAPO95166 117 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 KNG1P01042 644 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 RAB28P51157 221 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 ERVK-16P61578 105 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 IL13RA1P78552 427 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 CAPSQ13938 189 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 TRMT10BQ6PF06 316 aaKnown RBP9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 C17orf107Q6ZR85 190 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 PTGES2Q9H7Z7 377 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 IL26Q9NPH9 171 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 LIN7CQ9NUP9 197 aaKnown RBP9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 VPS29Q9UBQ0 182 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 F5P12259 2224 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 TMEM150CB9EJG8 249 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 OR2F2O95006 317 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 ASGR1P07306 291 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 PRSS3P35030 304 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 SUMO1P63165 101 aaKnown RBP9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 OR2F1Q13607 317 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 PCGF3Q3KNV8 242 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 FAM162BQ5T6X4 162 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 BRAT1Q6PJG6 821 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 TEX261Q6UWH6 196 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 NAA40Q86UY6 237 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 GPR26Q8NDV2 337 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 MSI2Q96DH6 328 aaKnown RBP9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 GORASP2Q9H8Y8 452 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 ABRACLQ9P1F3 81 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 U3KQ87 197 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 MT-CYBP00156 380 aaPredicted RBP9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 NRLP54845 237 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 PLA2G7Q13093 441 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 KIAA0141Q14154 515 aaPredicted RBP9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 PPP1R3AQ16821 1122 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 OR4K17Q8NGC6 315 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 OR6N2Q8NGY6 317 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 RNF170Q96K19 258 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 TPPP3Q9BW30 176 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 TRIM77I1YAP6 450 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 RAD1O60671 282 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 CILPO75339 1184 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 STBD1O95210 358 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 GOT2P00505 430 aaKnown RBP9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 TP53P04637 393 aaPredicted RBP9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 T-ENOLP0DO92 83 aa9.83□□□□□ -0.84
SPTBN1-201ENST00000333896 AMZ1Q400G9 498 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms