RNA–Protein interactions for RNA: ENST00000332859.10

SUMO3-201, Transcript of small ubiquitin-like modifier 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO3, Length 1,807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-201ENST00000332859 C11orf16Q9NQ32 467 aa18.72■□□□□ 0.59
SUMO3-201ENST00000332859 RASSF1Q9NS23 344 aa18.72■□□□□ 0.59
SUMO3-201ENST00000332859 WARS2Q9UGM6 360 aaKnown RBP18.72■□□□□ 0.59
SUMO3-201ENST00000332859 HYAL3O43820 417 aaPredicted RBP18.71■□□□□ 0.59
SUMO3-201ENST00000332859 OXSR1O95747 527 aaPredicted RBP18.71■□□□□ 0.59
SUMO3-201ENST00000332859 NFATC3Q12968 1075 aa18.71■□□□□ 0.59
SUMO3-201ENST00000332859 DCTN2Q13561 401 aaKnown RBP18.71■□□□□ 0.59
SUMO3-201ENST00000332859 GANABQ14697 944 aaKnown RBP18.71■□□□□ 0.59
SUMO3-201ENST00000332859 DUSP5Q16690 384 aa18.71■□□□□ 0.59
SUMO3-201ENST00000332859 QSOX2Q6ZRP7 698 aa18.71■□□□□ 0.59
SUMO3-201ENST00000332859 OR9Q2Q8NGE9 314 aa18.71■□□□□ 0.59
SUMO3-201ENST00000332859 FKBP10Q96AY3 582 aa18.71■□□□□ 0.59
SUMO3-201ENST00000332859 PTCHD1Q96NR3 888 aa18.71■□□□□ 0.59
SUMO3-201ENST00000332859 FUNDC2Q9BWH2 189 aa18.71■□□□□ 0.59
SUMO3-201ENST00000332859 MKKSQ9NPJ1 570 aaPredicted RBP18.71■□□□□ 0.59
SUMO3-201ENST00000332859 DUSP22Q9NRW4 184 aa18.71■□□□□ 0.59
SUMO3-201ENST00000332859 ENPP5Q9UJA9 477 aa18.71■□□□□ 0.59
SUMO3-201ENST00000332859 TMCC3Q9ULS5 477 aa18.71■□□□□ 0.59
SUMO3-201ENST00000332859 SPTBP11277 2137 aa18.71■□□□□ 0.59
SUMO3-201ENST00000332859 DSPPQ9NZW4 1301 aa18.7■□□□□ 0.58
SUMO3-201ENST00000332859 OR2W5A6NFC9 320 aa18.7■□□□□ 0.58
SUMO3-201ENST00000332859 SOX30O94993 753 aa18.7■□□□□ 0.58
SUMO3-201ENST00000332859 INMTO95050 263 aa18.7■□□□□ 0.58
SUMO3-201ENST00000332859 IFNA16P05015 189 aa18.7■□□□□ 0.58
SUMO3-201ENST00000332859 CSTF2P33240 577 aaKnown RBP eCLIP18.7■□□□□ 0.58
SUMO3-201ENST00000332859 ZNF155Q12901 538 aaPredicted RBP18.7■□□□□ 0.58
SUMO3-201ENST00000332859 ARHGAP11BQ3KRB8 267 aa18.7■□□□□ 0.58
SUMO3-201ENST00000332859 FGD3Q5JSP0 725 aa18.7■□□□□ 0.58
SUMO3-201ENST00000332859 SYT6Q5T7P8 510 aaPredicted RBP18.7■□□□□ 0.58
SUMO3-201ENST00000332859 MFSD4BQ5TF39 518 aa18.7■□□□□ 0.58
SUMO3-201ENST00000332859 RHOXF1Q8NHV9 184 aa18.7■□□□□ 0.58
SUMO3-201ENST00000332859 FAM81AQ8TBF8 368 aa18.7■□□□□ 0.58
SUMO3-201ENST00000332859 SIGLEC11Q96RL6 698 aa18.7■□□□□ 0.58
SUMO3-201ENST00000332859 SLC38A1Q9H2H9 487 aa18.7■□□□□ 0.58
SUMO3-201ENST00000332859 TRIM45Q9H8W5 580 aaPredicted RBP18.7■□□□□ 0.58
SUMO3-201ENST00000332859 AASSQ9UDR5 926 aa18.7■□□□□ 0.58
SUMO3-201ENST00000332859 ACAD8Q9UKU7 415 aa18.7■□□□□ 0.58
SUMO3-201ENST00000332859 COL5A1P20908 1838 aaPredicted RBP18.7■□□□□ 0.58
SUMO3-201ENST00000332859 FFAR1O14842 300 aa18.7■□□□□ 0.58
SUMO3-201ENST00000332859 SCRG1O75711 98 aa18.7■□□□□ 0.58
SUMO3-201ENST00000332859 ADAP00813 363 aa18.7■□□□□ 0.58
SUMO3-201ENST00000332859 MT-ND2P03891 347 aa18.7■□□□□ 0.58
SUMO3-201ENST00000332859 S1PR1P21453 382 aa18.7■□□□□ 0.58
SUMO3-201ENST00000332859 ACVR2AP27037 513 aa18.7■□□□□ 0.58
SUMO3-201ENST00000332859 SMN1Q16637 294 aaKnown RBP18.7■□□□□ 0.58
SUMO3-201ENST00000332859 MINDY4Q4G0A6 757 aa18.7■□□□□ 0.58
SUMO3-201ENST00000332859 ZNF770Q6IQ21 691 aaPredicted RBP18.7■□□□□ 0.58
SUMO3-201ENST00000332859 OLIG3Q7RTU3 272 aa18.7■□□□□ 0.58
SUMO3-201ENST00000332859 BPHLQ86WA6 291 aaPredicted RBP18.7■□□□□ 0.58
SUMO3-201ENST00000332859 AQP11Q8NBQ7 271 aa18.7■□□□□ 0.58
SUMO3-201ENST00000332859 SATB2Q9UPW6 733 aa18.7■□□□□ 0.58
SUMO3-201ENST00000332859 PRR33A8MZF0 331 aa18.69■□□□□ 0.58
SUMO3-201ENST00000332859 AGRPO00253 132 aa18.69■□□□□ 0.58
SUMO3-201ENST00000332859 FAAHO00519 579 aa18.69■□□□□ 0.58
SUMO3-201ENST00000332859 AK1P00568 194 aa18.69■□□□□ 0.58
SUMO3-201ENST00000332859 ALPPP05187 535 aa18.69■□□□□ 0.58
SUMO3-201ENST00000332859 HBQ1P09105 142 aa18.69■□□□□ 0.58
SUMO3-201ENST00000332859 ZNF806P0C7X5 589 aa18.69■□□□□ 0.58
SUMO3-201ENST00000332859 CHRNEQ04844 493 aa18.69■□□□□ 0.58
SUMO3-201ENST00000332859 ZFP36L1Q07352 338 aaKnown RBP18.69■□□□□ 0.58
SUMO3-201ENST00000332859 DUSP8Q13202 625 aa18.69■□□□□ 0.58
SUMO3-201ENST00000332859 ZNF267Q14586 743 aaPredicted RBP18.69■□□□□ 0.58
SUMO3-201ENST00000332859 TCTN3Q6NUS6 607 aa18.69■□□□□ 0.58
SUMO3-201ENST00000332859 PPP1R3BQ86XI6 285 aa18.69■□□□□ 0.58
SUMO3-201ENST00000332859 COX18Q8N8Q8 333 aa18.69■□□□□ 0.58
SUMO3-201ENST00000332859 HOXB13Q92826 284 aaPredicted RBP18.69■□□□□ 0.58
SUMO3-201ENST00000332859 ATOH1Q92858 354 aaPredicted RBP18.69■□□□□ 0.58
SUMO3-201ENST00000332859 UBE2FQ969M7 185 aa18.69■□□□□ 0.58
SUMO3-201ENST00000332859 NMNAT1Q9HAN9 279 aaPredicted RBP18.69■□□□□ 0.58
SUMO3-201ENST00000332859 MGAT4BQ9UQ53 548 aa18.69■□□□□ 0.58
SUMO3-201ENST00000332859 IGKV3D-11A0A0A0MRZ8 115 aa18.68■□□□□ 0.58
SUMO3-201ENST00000332859 PRAMEF2O60811 474 aa18.68■□□□□ 0.58
SUMO3-201ENST00000332859 BCL10O95999 233 aa18.68■□□□□ 0.58
SUMO3-201ENST00000332859 H1F0P07305 194 aaKnown RBP18.68■□□□□ 0.58
SUMO3-201ENST00000332859 TNNI3P19429 210 aa18.68■□□□□ 0.58
SUMO3-201ENST00000332859 MAP3K8P41279 467 aa18.68■□□□□ 0.58
SUMO3-201ENST00000332859 PDX1P52945 283 aa18.68■□□□□ 0.58
SUMO3-201ENST00000332859 SF3A2Q15428 464 aaKnown RBP18.68■□□□□ 0.58
SUMO3-201ENST00000332859 ZNHIT3Q15649 155 aaPredicted RBP18.68■□□□□ 0.58
SUMO3-201ENST00000332859 Q6ZPB1 254 aaPredicted RBP18.68■□□□□ 0.58
SUMO3-201ENST00000332859 AGBL5Q8NDL9 886 aa18.68■□□□□ 0.58
SUMO3-201ENST00000332859 GPR151Q8TDV0 419 aa18.68■□□□□ 0.58
SUMO3-201ENST00000332859 FCGR1BQ92637 280 aa18.68■□□□□ 0.58
SUMO3-201ENST00000332859 MYDGFQ969H8 173 aa18.68■□□□□ 0.58
SUMO3-201ENST00000332859 CLIP3Q96DZ5 547 aa18.68■□□□□ 0.58
SUMO3-201ENST00000332859 LMF2Q9BU23 707 aaKnown RBP18.68■□□□□ 0.58
SUMO3-201ENST00000332859 CNPPD1Q9BV87 410 aa18.68■□□□□ 0.58
SUMO3-201ENST00000332859 PINK1Q9BXM7 581 aa18.68■□□□□ 0.58
SUMO3-201ENST00000332859 CACYBPQ9HB71 228 aaKnown RBP18.68■□□□□ 0.58
SUMO3-201ENST00000332859 FOLH1BQ9HBA9 442 aa18.68■□□□□ 0.58
SUMO3-201ENST00000332859 NUP210LQ5VU65 1888 aa18.68■□□□□ 0.58
SUMO3-201ENST00000332859 NINQ8N4C6 2090 aa18.68■□□□□ 0.58
SUMO3-201ENST00000332859 EFCAB7A8K855 629 aa18.67■□□□□ 0.58
SUMO3-201ENST00000332859 MPZL2O60487 215 aa18.67■□□□□ 0.58
SUMO3-201ENST00000332859 TIAF1O95411 115 aa18.67■□□□□ 0.58
SUMO3-201ENST00000332859 SSTR4P31391 388 aa18.67■□□□□ 0.58
SUMO3-201ENST00000332859 PGDP52209 483 aa18.67■□□□□ 0.58
SUMO3-201ENST00000332859 RHAGQ02094 409 aa18.67■□□□□ 0.58
SUMO3-201ENST00000332859 FUT7Q11130 342 aa18.67■□□□□ 0.58
SUMO3-201ENST00000332859 DCST1Q5T197 706 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms