RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 TBC1D17Q9HA65 648 aa12.54□□□□□ -0.4
TUBA1B-201ENST00000332858 SLC13A4Q9UKG4 626 aa12.54□□□□□ -0.4
TUBA1B-201ENST00000332858 KDM4EB2RXH2 506 aaPredicted RBP12.54□□□□□ -0.4
TUBA1B-201ENST00000332858 SURF4O15260 269 aa12.54□□□□□ -0.4
TUBA1B-201ENST00000332858 TMCC2O75069 709 aa12.54□□□□□ -0.4
TUBA1B-201ENST00000332858 PRG2P13727 222 aa12.54□□□□□ -0.4
TUBA1B-201ENST00000332858 C5AR1P21730 350 aa12.54□□□□□ -0.4
TUBA1B-201ENST00000332858 APEX1P27695 318 aaKnown RBP12.54□□□□□ -0.4
TUBA1B-201ENST00000332858 SLC1A3P43003 542 aa12.54□□□□□ -0.4
TUBA1B-201ENST00000332858 RGS8P57771 180 aaPredicted RBP12.54□□□□□ -0.4
TUBA1B-201ENST00000332858 SIM1P81133 766 aaPredicted RBP12.54□□□□□ -0.4
TUBA1B-201ENST00000332858 ST3GAL3Q11203 375 aa12.54□□□□□ -0.4
TUBA1B-201ENST00000332858 GPM6BQ13491 265 aa12.54□□□□□ -0.4
TUBA1B-201ENST00000332858 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.54□□□□□ -0.42e-6■■□□□ 14.5
TUBA1B-201ENST00000332858 AADACL4Q5VUY2 407 aa12.54□□□□□ -0.4
TUBA1B-201ENST00000332858 QSOX2Q6ZRP7 698 aa12.54□□□□□ -0.4
TUBA1B-201ENST00000332858 MFSD9Q8NBP5 474 aa12.54□□□□□ -0.4
TUBA1B-201ENST00000332858 ZCCHC10Q8TBK6 192 aa12.54□□□□□ -0.4
TUBA1B-201ENST00000332858 CHAC2Q8WUX2 184 aa12.54□□□□□ -0.4
TUBA1B-201ENST00000332858 OTULINQ96BN8 352 aa12.54□□□□□ -0.4
TUBA1B-201ENST00000332858 MCHR1Q99705 422 aa12.54□□□□□ -0.4
TUBA1B-201ENST00000332858 CD93Q9NPY3 652 aa12.54□□□□□ -0.4
TUBA1B-201ENST00000332858 BOLA1Q9Y3E2 137 aa12.54□□□□□ -0.4
TUBA1B-201ENST00000332858 ZNF780BQ9Y6R6 833 aa12.54□□□□□ -0.4
TUBA1B-201ENST00000332858 C2orf92A0A1B0GVN3 265 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 GPR89AB7ZAQ6 455 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 SOCS6O14544 535 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 GPR89BP0CG08 455 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 CELP19835 753 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 STXBP1P61764 594 aaKnown RBP12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 GNA13Q14344 377 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 CEBPEQ15744 281 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 GLCCI1Q86VQ1 547 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 JAZF1Q86VZ6 243 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 GALNT12Q8IXK2 581 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 CLDN22Q8N7P3 220 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 ZNF784Q8NCA9 323 aaPredicted RBP12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 ATP6V1C2Q8NEY4 427 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 ADAMTS15Q8TE58 950 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 TP53INP1Q96A56 240 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 ST6GAL2Q96JF0 529 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 APOOQ9BUR5 198 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 IGFLR1Q9H665 355 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 FBXO34Q9NWN3 711 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 MEIOCA2RUB1 952 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 SYT5O00445 386 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 PLA2G10O15496 165 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 SPTBP11277 2137 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 PPP2CBP62714 309 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 RPS21P63220 83 aaKnown RBP12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 PPP2CAP67775 309 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 P2RY14Q15391 338 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 DEFB134Q4QY38 66 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 VASNQ6EMK4 673 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 HSDL2Q6YN16 418 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 PLEKHM3Q6ZWE6 761 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 FAM181AQ8N9Y4 354 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 POGLUT1Q8NBL1 392 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 UFD1Q92890 307 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 SLC41A3Q96GZ6 507 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 SLC38A2Q96QD8 506 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 ACTRT3Q9BYD9 372 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 MED20Q9H944 212 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 IL20Q9NYY1 176 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 SLC7A7Q9UM01 511 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 TBC1D3DA0A087WVF3 549 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 TBC1D3IA0A087WXS9 549 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 TBC1D3EA0A087X179 549 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 TBC1D3KA0A087X1G2 549 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 A0A0B4J293 547 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 TBC1D3FA6NER0 549 aaPredicted RBP12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 ZNF860A6NHJ4 632 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 TBC1D3LB9A6J9 549 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 SLC30A4O14863 429 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 P2RX6O15547 441 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 RNGTTO60942 597 aaKnown RBP12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 TBC1D3HP0C7X1 549 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 ANXA11P50995 505 aaKnown RBP12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 MAPK14Q16539 360 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 TRMT12Q53H54 448 aaKnown RBP12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 TBC1D3GQ6DHY5 549 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 TBC1D3CQ6IPX1 549 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 FBXO42Q6P3S6 717 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 AMIGO1Q86WK6 493 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 TBC1D3Q8IZP1 549 aaPredicted RBP12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 PIGXQ8TBF5 258 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 SETD6Q8TBK2 473 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 LCN9Q8WX39 176 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 ACOT11Q8WXI4 607 aaPredicted RBP12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 FGF14Q92915 247 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 RNF31Q96EP0 1072 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 ART5Q96L15 291 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 SAMD8Q96LT4 415 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 SARGQ9BW04 601 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 ISG20L2Q9H9L3 353 aaKnown RBP12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 HINT3Q9NQE9 182 aaKnown RBP12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 DPP7Q9UHL4 492 aa12.53□□□□□ -0.4
TUBA1B-201ENST00000332858 NPIPA5A0A0B4J1W7 369 aa12.52□□□□□ -0.41
TUBA1B-201ENST00000332858 NPIPA7E9PJI5 369 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms