RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 GYPBP06028 91 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 BMP1P13497 986 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 OTX2P32243 289 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 ACTC1P68032 377 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 ACTA1P68133 377 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 EMX1Q04741 257 aaPredicted RBP12.24□□□□□ -0.45
VSTM4-202ENST00000332853 ACVR1Q04771 509 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 TMEM239Q8WW34 195 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 PLEKHA6Q9Y2H5 1048 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 CAPNS1P04632 268 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 SBK3P0C264 359 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 PRAMEF17Q5VTA0 474 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 TOR1AIP2Q8NFQ8 470 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 ADAMTS16Q8TE57 1224 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 NAA50Q9GZZ1 169 aaKnown RBP12.24□□□□□ -0.45
VSTM4-202ENST00000332853 TAS2R10Q9NYW0 307 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 SLC19A2O60779 497 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 PEPDP12955 493 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 OPRL1P41146 370 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 CDKN3Q16667 212 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 ADAMTSL4Q6UY14 1074 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 CHRDL2Q6WN34 429 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 PAQR7Q86WK9 346 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 TMPRSS12Q86WS5 348 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 IQCF2Q8IXL9 164 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 MMP21Q8N119 569 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 TANKQ92844 425 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 RFT1Q96AA3 541 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 SAP130Q9H0E3 1048 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 EGLN3Q9H6Z9 239 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 CXorf36Q9H7Y0 433 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 KLHL21Q9UJP4 597 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 STOML2Q9UJZ1 356 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 NUMA1Q14980 2115 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 KIR2DS5A0A0G2JLQ3 304 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 A0A0G2JNG1 304 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 FAM183AA6NL82 134 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 KIR2DS3K7RE56 304 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 TP53I11O14683 189 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 KCNK5O95279 499 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 GASTP01350 101 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 CSTBP04080 98 aaKnown RBP12.24□□□□□ -0.45
VSTM4-202ENST00000332853 GALK2Q01415 458 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 SNTA1Q13424 505 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 KIR2DS5Q14953 304 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 MFSD9Q8NBP5 474 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 VN1R2Q8NFZ6 395 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 SLC38A5Q8WUX1 472 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 PRRC1Q96M27 445 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 PBX4Q9BYU1 374 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 B3GAT2Q9NPZ5 323 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 ITGB1BP2Q9UKP3 347 aa12.24□□□□□ -0.45
VSTM4-202ENST00000332853 RAD1O60671 282 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 ITGAMP11215 1152 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 S1PR1P21453 382 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 OR1D4P47884 311 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 DUSP3P51452 185 aaPredicted RBP12.23□□□□□ -0.45
VSTM4-202ENST00000332853 PHC1P78364 1004 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 CHRNEQ04844 493 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 TP53I3Q53FA7 332 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 OR6C4Q8NGE1 309 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 CEP76Q8TAP6 659 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 TMEM41AQ96HV5 264 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 PKMYT1Q99640 499 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.23□□□□□ -0.45
VSTM4-202ENST00000332853 CARD8Q9Y2G2 431 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 C12orf71A8MTZ7 269 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 H0Y8X5 98 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 PBX2P40425 430 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 NKAIN2Q5VXU1 208 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 KIAA0895LQ68EN5 471 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 ABHD11Q8NFV4 315 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 PNPLA2Q96AD5 504 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 TREX2Q9BQ50 279 aaPredicted RBP12.23□□□□□ -0.45
VSTM4-202ENST00000332853 STRADBQ9C0K7 418 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 TBX21Q9UL17 535 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 ATAD5Q96QE3 1844 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 H3BML4 177 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 CPMP14384 443 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 CRHBPP24387 322 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 TBPL2Q6SJ96 375 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 FOXRED2Q8IWF2 684 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 ATG5Q9H1Y0 275 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 ZNF224Q9NZL3 707 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 LRIT1Q9P2V4 623 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 CD300AQ9UGN4 299 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 PPT2Q9UMR5 302 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 DHDHQ9UQ10 334 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 IER3IP1Q9Y5U9 82 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 ZNF195O14628 629 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 KIAA0355O15063 1070 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 SEC14L5O43304 696 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 CXCL10P02778 98 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 OPN1LWP04000 364 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 CD38P28907 300 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 TM4SF18Q96CE8 201 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 METTL2AQ96IZ6 378 aaKnown RBP12.23□□□□□ -0.45
VSTM4-202ENST00000332853 PITHD1Q9GZP4 211 aaPredicted RBP12.23□□□□□ -0.45
VSTM4-202ENST00000332853 TRPV4Q9HBA0 871 aa12.23□□□□□ -0.45
VSTM4-202ENST00000332853 VDAC3Q9Y277 283 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms