RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 SPNP16150 400 aa20.86■□□□□ 0.93
PNKP-201ENST00000322344 TMED10P49755 219 aaKnown RBP20.86■□□□□ 0.93
PNKP-201ENST00000322344 YPEL5P62699 121 aa20.86■□□□□ 0.93
PNKP-201ENST00000322344 HOXC5Q00444 222 aa20.86■□□□□ 0.93
PNKP-201ENST00000322344 TCEA2Q15560 299 aa20.86■□□□□ 0.93
PNKP-201ENST00000322344 DUSP5Q16690 384 aa20.86■□□□□ 0.93
PNKP-201ENST00000322344 FLYWCH1Q4VC44 716 aa20.86■□□□□ 0.93
PNKP-201ENST00000322344 ZNF628Q5EBL2 1059 aa20.86■□□□□ 0.93
PNKP-201ENST00000322344 CLEC12AQ5QGZ9 265 aa20.86■□□□□ 0.93
PNKP-201ENST00000322344 CCBE1Q6UXH8 406 aaPredicted RBP20.86■□□□□ 0.93
PNKP-201ENST00000322344 RANBP3LQ86VV4 465 aaPredicted RBP20.86■□□□□ 0.93
PNKP-201ENST00000322344 GPR151Q8TDV0 419 aa20.86■□□□□ 0.93
PNKP-201ENST00000322344 SDF2Q99470 211 aa20.86■□□□□ 0.93
PNKP-201ENST00000322344 SNRNP200O75643 2136 aaKnown RBP20.86■□□□□ 0.93
PNKP-201ENST00000322344 ATP6V1G1O75348 118 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 THY1P04216 161 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 POLR2CP19387 275 aaPredicted RBP20.85■□□□□ 0.93
PNKP-201ENST00000322344 GABRA5P31644 462 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 SLC9A3P48764 834 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 SRP54P61011 504 aaKnown RBP20.85■□□□□ 0.93
PNKP-201ENST00000322344 EEF1A1P68104 462 aaKnown RBP20.85■□□□□ 0.93
PNKP-201ENST00000322344 OR2G6Q5TZ20 316 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 QSOX2Q6ZRP7 698 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 TRIM48Q8IWZ4 208 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 ZFYVE21Q9BQ24 234 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 ARHGAP9Q9BRR9 750 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 ZNF350Q9GZX5 532 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 ERVK13-1Q9NX77 482 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 SATB2Q9UPW6 733 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 GSTK1Q9Y2Q3 226 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 SF3B6Q9Y3B4 125 aaKnown RBP20.85■□□□□ 0.93
PNKP-201ENST00000322344 V9GYH0 126 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 A0A087WV62 115 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 PLD2O14939 933 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 DBIP07108 87 aaKnown RBP20.85■□□□□ 0.93
PNKP-201ENST00000322344 IFI6P09912 130 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 LIMS3P0CW19 117 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 LIMS4P0CW20 117 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 GPR4P46093 362 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 DSG2Q14126 1118 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 EXOSC6Q5RKV6 272 aaKnown RBP20.85■□□□□ 0.93
PNKP-201ENST00000322344 FHL5Q5TD97 284 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 C22orf42Q6IC83 251 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 SLC30A6Q6NXT4 461 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 ZCCHC12Q6PEW1 402 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 HSDL2Q6YN16 418 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 OR8H2Q8N162 312 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 ZNF619Q8N2I2 560 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 ZNF655Q8N720 491 aaPredicted RBP20.85■□□□□ 0.93
PNKP-201ENST00000322344 GATAD2BQ8WXI9 593 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 TM9SF4Q92544 642 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 RERGQ96A58 199 aaPredicted RBP20.85■□□□□ 0.93
PNKP-201ENST00000322344 MSLNLQ96KJ4 702 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 INIPQ9NRY2 104 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 EXOGQ9Y2C4 368 aaKnown RBP20.85■□□□□ 0.93
PNKP-201ENST00000322344 NTNG1Q9Y2I2 539 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 ENTPD2Q9Y5L3 495 aa20.85■□□□□ 0.93
PNKP-201ENST00000322344 OR6C74A6NCV1 312 aa20.84■□□□□ 0.93
PNKP-201ENST00000322344 TMEM221A6NGB7 291 aa20.84■□□□□ 0.93
PNKP-201ENST00000322344 NDUFV2P19404 249 aa20.84■□□□□ 0.93
PNKP-201ENST00000322344 RPS4Y1P22090 263 aaKnown RBP20.84■□□□□ 0.93
PNKP-201ENST00000322344 SLC1A3P43003 542 aa20.84■□□□□ 0.93
PNKP-201ENST00000322344 LBX1P52954 281 aa20.84■□□□□ 0.93
PNKP-201ENST00000322344 SNRPNP63162 240 aaKnown RBP20.84■□□□□ 0.93
PNKP-201ENST00000322344 NXNL2Q5VZ03 156 aa20.84■□□□□ 0.93
PNKP-201ENST00000322344 AKAP14Q86UN6 197 aa20.84■□□□□ 0.93
PNKP-201ENST00000322344 OR4N5Q8IXE1 308 aa20.84■□□□□ 0.93
PNKP-201ENST00000322344 OR2T33Q8NG76 320 aa20.84■□□□□ 0.93
PNKP-201ENST00000322344 OR10G6Q8NH81 332 aa20.84■□□□□ 0.93
PNKP-201ENST00000322344 TMEM255BQ8WV15 326 aa20.84■□□□□ 0.93
PNKP-201ENST00000322344 C1GALT1C1Q96EU7 318 aa20.84■□□□□ 0.93
PNKP-201ENST00000322344 MRGPRX1Q96LB2 322 aa20.84■□□□□ 0.93
PNKP-201ENST00000322344 S1PR5Q9H228 398 aa20.84■□□□□ 0.93
PNKP-201ENST00000322344 SACM1LQ9NTJ5 587 aa20.84■□□□□ 0.93
PNKP-201ENST00000322344 TICRRQ7Z2Z1 1910 aa20.83■□□□□ 0.93
PNKP-201ENST00000322344 FAM221BA6H8Z2 402 aa20.83■□□□□ 0.93
PNKP-201ENST00000322344 LRRC72A6NJI9 287 aa20.83■□□□□ 0.93
PNKP-201ENST00000322344 STX11O75558 287 aa20.83■□□□□ 0.93
PNKP-201ENST00000322344 APOL3O95236 402 aa20.83■□□□□ 0.93
PNKP-201ENST00000322344 FGF9P31371 208 aaPredicted RBP20.83■□□□□ 0.93
PNKP-201ENST00000322344 ZNF136P52737 540 aa20.83■□□□□ 0.93
PNKP-201ENST00000322344 MRPS21P82921 87 aaKnown RBP20.83■□□□□ 0.93
PNKP-201ENST00000322344 GPR18Q14330 331 aa20.83■□□□□ 0.93
PNKP-201ENST00000322344 ALG11Q2TAA5 492 aa20.83■□□□□ 0.93
PNKP-201ENST00000322344 MANEAQ5SRI9 462 aa20.83■□□□□ 0.93
PNKP-201ENST00000322344 KIAA1324Q6UXG2 1013 aaKnown RBP20.83■□□□□ 0.93
PNKP-201ENST00000322344 LAX1Q8IWV1 398 aa20.83■□□□□ 0.93
PNKP-201ENST00000322344 FAM181AQ8N9Y4 354 aa20.83■□□□□ 0.93
PNKP-201ENST00000322344 COQ7Q99807 217 aa20.83■□□□□ 0.93
PNKP-201ENST00000322344 DUSP22Q9NRW4 184 aa20.83■□□□□ 0.93
PNKP-201ENST00000322344 SLC7A7Q9UM01 511 aa20.83■□□□□ 0.93
PNKP-201ENST00000322344 TRAPPC13A5PLN9 417 aa20.83■□□□□ 0.92
PNKP-201ENST00000322344 CHST10O43529 356 aa20.83■□□□□ 0.92
PNKP-201ENST00000322344 NTN1O95631 604 aa20.83■□□□□ 0.92
PNKP-201ENST00000322344 AK1P00568 194 aa20.83■□□□□ 0.92
PNKP-201ENST00000322344 ATP1B1P05026 303 aa20.83■□□□□ 0.92
PNKP-201ENST00000322344 HTR1FP30939 366 aa20.83■□□□□ 0.92
PNKP-201ENST00000322344 AKT2P31751 481 aa20.83■□□□□ 0.92
PNKP-201ENST00000322344 TPTEP56180 551 aa20.83■□□□□ 0.92
PNKP-201ENST00000322344 RPS25P62851 125 aaKnown RBP20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms