RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 DEKP35659 375 aaKnown RBP11.9□□□□□ -0.5
SYCN-201ENST00000318438 ALDH9A1P49189 494 aa11.9□□□□□ -0.5
SYCN-201ENST00000318438 CASP9P55211 416 aa11.9□□□□□ -0.5
SYCN-201ENST00000318438 IMPG1Q17R60 797 aa11.9□□□□□ -0.5
SYCN-201ENST00000318438 TMEM249Q2WGJ8 235 aa11.9□□□□□ -0.5
SYCN-201ENST00000318438 YRDCQ86U90 279 aaKnown RBP11.9□□□□□ -0.5
SYCN-201ENST00000318438 CNEP1R1Q8N9A8 125 aa11.9□□□□□ -0.5
SYCN-201ENST00000318438 OR7G1Q8NGA0 311 aa11.9□□□□□ -0.5
SYCN-201ENST00000318438 DOK4Q8TEW6 326 aa11.9□□□□□ -0.5
SYCN-201ENST00000318438 AKAP1Q92667 903 aaKnown RBP eCLIP11.9□□□□□ -0.5
SYCN-201ENST00000318438 RILPQ96NA2 401 aa11.9□□□□□ -0.5
SYCN-201ENST00000318438 GAL3ST4Q96RP7 486 aa11.9□□□□□ -0.5
SYCN-201ENST00000318438 SHCBP1LQ9BZQ2 653 aa11.9□□□□□ -0.5
SYCN-201ENST00000318438 SENP1Q9P0U3 644 aa11.9□□□□□ -0.5
SYCN-201ENST00000318438 MAPRE3Q9UPY8 281 aa11.9□□□□□ -0.5
SYCN-201ENST00000318438 DTX4Q9Y2E6 619 aa11.9□□□□□ -0.5
SYCN-201ENST00000318438 PGRP06401 933 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 THBDP07204 575 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 SOD3P08294 240 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 IL3P08700 152 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 CPN1P15169 458 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 FEN1P39748 380 aaKnown RBP11.89□□□□□ -0.51
SYCN-201ENST00000318438 KCNJ5P48544 419 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 MASP1P48740 699 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 PCYT1AP49585 367 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 ZNF763Q0D2J5 394 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 HEPACAMQ14CZ8 416 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 NTRK2Q16620 822 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 PRICKLE4Q2TBC4 344 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 BEX5Q5H9J7 111 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 SPDYAQ5MJ70 313 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 TBCELQ5QJ74 424 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 SCIMPQ6UWF3 145 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 C12orf54Q6X4T0 127 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 TMEM64Q6YI46 380 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 RNF165Q6ZSG1 346 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 HOMEZQ8IX15 550 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 SAMD14Q8IZD0 417 aaPredicted RBP11.89□□□□□ -0.51
SYCN-201ENST00000318438 TAGAPQ8N103 731 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 ZNF615Q8N8J6 731 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 FAM83FQ8NEG4 500 aaPredicted RBP11.89□□□□□ -0.51
SYCN-201ENST00000318438 C17orf47Q8NEP4 570 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 FAM76AQ8TAV0 307 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 TCP10LQ8TDR4 215 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 C16orf78Q8WTQ4 265 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 GTPBP3Q969Y2 492 aaKnown RBP11.89□□□□□ -0.51
SYCN-201ENST00000318438 TP53INP1Q96A56 240 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 CNRIP1Q96F85 164 aaPredicted RBP11.89□□□□□ -0.51
SYCN-201ENST00000318438 PGM2Q96G03 612 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 METTL2AQ96IZ6 378 aaKnown RBP11.89□□□□□ -0.51
SYCN-201ENST00000318438 ZNF681Q96N22 645 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 GATA5Q9BWX5 397 aaPredicted RBP11.89□□□□□ -0.51
SYCN-201ENST00000318438 OR10A5Q9H207 317 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 TNFRSF12AQ9NP84 129 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 RRAGDQ9NQL2 400 aaPredicted RBP11.89□□□□□ -0.51
SYCN-201ENST00000318438 EHD3Q9NZN3 535 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 SLC17A7Q9P2U7 560 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 HEY2Q9UBP5 337 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 UTS2RQ9UKP6 389 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 DLGAP4Q9Y2H0 992 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 ZNF780BQ9Y6R6 833 aa11.89□□□□□ -0.51
SYCN-201ENST00000318438 IGHV4-30-2A0A087WSY4 118 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 A0A096LNT2 108 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 C2orf92A0A1B0GVN3 265 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 NPIPB8E9PQR5 432 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 AZIN1O14977 448 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 NPHS1O60500 1241 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 SPAG7O75391 227 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 TGM6O95932 706 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 ACTL6AO96019 429 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 ANXA4P09525 319 aaPredicted RBP11.88□□□□□ -0.51
SYCN-201ENST00000318438 ZNF16P17020 682 aaPredicted RBP11.88□□□□□ -0.51
SYCN-201ENST00000318438 S1PR1P21453 382 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 PRPH2P23942 346 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 ALDH3A1P30838 453 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 EEF1A1P68104 462 aaKnown RBP11.88□□□□□ -0.51
SYCN-201ENST00000318438 BTKQ06187 659 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 ZNF844Q08AG5 666 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 MGAT2Q10469 447 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 MAP4K2Q12851 820 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 KRT71Q3SY84 523 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 PDLIM3Q53GG5 364 aaPredicted RBP11.88□□□□□ -0.51
SYCN-201ENST00000318438 EEF1A1P5Q5VTE0 462 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 HLA-DQA1Q5Y7H0 255 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 KANK2Q63ZY3 851 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 CLEC6AQ6EIG7 209 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.88□□□□□ -0.51
SYCN-201ENST00000318438 GRAMD2AQ8IUY3 354 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 CTHRC1Q96CG8 243 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 PLPPR2Q96GM1 343 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 UCN2Q96RP3 112 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 SLC39A3Q9BRY0 314 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 MECRQ9BV79 373 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 EBPLQ9BY08 206 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 BRINP2Q9C0B6 783 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 KLHL4Q9C0H6 718 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 MAT2BQ9NZL9 334 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 ZNF639Q9UID6 485 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 LIPT1Q9Y234 373 aa11.88□□□□□ -0.51
SYCN-201ENST00000318438 CFL2Q9Y281 166 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms