RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 TMEM156Q8N614 296 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 SLC5A8Q8N695 610 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 THAP4Q8WY91 577 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 PSMF1Q92530 271 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 IP6K3Q96PC2 410 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 RSPO3Q9BXY4 272 aaPredicted RBP14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 THUMPD1Q9NXG2 353 aaKnown RBP14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 ACTR3BQ9P1U1 418 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 SEC14L3Q9UDX4 400 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 KCNE5Q9UJ90 142 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 AURKCQ9UQB9 309 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 LIPT1Q9Y234 373 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 AP3M1Q9Y2T2 418 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 BSNQ9UPA5 3926 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 G3V3Y1 287 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 FRS3O43559 492 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 IL7RP16871 459 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 OR1E2P47887 323 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 DCAF7P61962 342 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 CCNIQ14094 377 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 DUSP7Q16829 419 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 NDUFAF6Q330K2 333 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 ACER2Q5QJU3 275 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 COMTD1Q86VU5 262 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 ARMC8Q8IUR7 673 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 TAGAPQ8N103 731 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 TMEM102Q8N9M5 508 aaPredicted RBP14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 OR10G3Q8NGC4 313 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 ASB15Q8WXK1 588 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 ZCCHC14Q8WYQ9 949 aaKnown RBP14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 DIO2Q92813 273 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 HOXB13Q92826 284 aaPredicted RBP14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 SPATA9Q9BWV2 254 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 PLA2G3Q9NZ20 509 aa14.18□□□□□ -0.14
PDLIM5-202ENST00000318007 PRRC2CQ9Y520 2896 aaKnown RBP14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 TAF4O00268 1085 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 SCO2O43819 266 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 TPST1O60507 370 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 UGT2B17O75795 530 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 CYP7B1O75881 506 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 NADKO95544 446 aaPredicted RBP14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 CYP4B1P13584 511 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 HPGDP15428 266 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 DCTP40126 519 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 PCBP3P57721 371 aaKnown RBP14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 OC90Q02509 493 aaPredicted RBP14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 VEZF1Q14119 521 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 INTS11Q5TA45 600 aaKnown RBP14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 PRAMEF20Q5VT98 475 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 IRAK1BP1Q5VVH5 260 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 LRRC69Q6ZNQ3 347 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 LRRC74BQ6ZQY2 392 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 FKBP9P1Q75LS8 142 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 SLC34A3Q8N130 599 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 ZNF619Q8N2I2 560 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 CHDHQ8NE62 594 aaPredicted RBP14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 FDCSPQ8NFU4 85 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 OR8K3Q8NH51 312 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 VANGL1Q8TAA9 524 aaPredicted RBP14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 PYDC1Q8WXC3 89 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 HSPBAP1Q96EW2 488 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 CRELD1Q96HD1 420 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 RSRC1Q96IZ7 334 aaKnown RBP14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 G6PC3Q9BUM1 346 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 FAM117AQ9C073 453 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 LHPPQ9H008 270 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 GALNT9Q9HCQ5 603 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 STMN3Q9NZ72 180 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 SH3GLB1Q9Y371 365 aa14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 RRP15Q9Y3B9 282 aaKnown RBP14.17□□□□□ -0.14
PDLIM5-202ENST00000318007 BCAS1O75363 584 aaPredicted RBP14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 PRKD3O94806 890 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 UTS2O95399 124 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 SSR4P51571 173 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 RRADP55042 308 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 GNA13Q14344 377 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 GRAMD1BQ3KR37 738 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 CYBRD1Q53TN4 286 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 ZNF311Q5JNZ3 666 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 OR5M10Q6IEU7 315 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 OR52P1PQ8NH57 321 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 BBS10Q8TAM1 723 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 SLC22A8Q8TCC7 542 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 ZNF607Q96SK3 696 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 WFDC6Q9BQY6 131 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 RTN4RQ9BZR6 473 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 CNTRLQ7Z7A1 2325 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 ACOX3O15254 700 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 KIAA0513O60268 411 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 IL33O95760 270 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 MLF1P58340 268 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 CXADRP78310 365 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 HOXC5Q00444 222 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 ABHD17BQ5VST6 288 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 LCN8Q6JVE9 175 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 PROSER1Q86XN7 944 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 KRT73Q86Y46 540 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 TP53INP1Q96A56 240 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 HSH2DQ96JZ2 352 aa14.16□□□□□ -0.14
PDLIM5-202ENST00000318007 NODALQ96S42 347 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms