RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 PCSK9Q8NBP7 692 aaKnown RBP4.28□□□□□ -1.72
CNOT1-201ENST00000317147 OR2L2Q8NH16 312 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 OR5P2Q8WZ92 322 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 TFAP2BQ92481 460 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 TMIGD2Q96BF3 282 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 SENP8Q96LD8 212 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 C12orf42Q96LP6 360 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 SLC2A13Q96QE2 648 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 TMPRSS13Q9BYE2 586 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 POLR1DQ9Y2S0 133 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 MED31Q9Y3C7 131 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 SLC22A7Q9Y694 548 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 PKD1L2Q7Z442 2459 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 ZSWIM8A7E2V4 1837 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 LOC285556D6RIA3 1793 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 LRP5LA4QPB2 252 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 ZNF821O75541 412 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-201ENST00000317147 MT-ND4LP03901 98 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 IL5P05113 134 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 CD34P28906 385 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 TIA1P31483 386 aaKnown RBP eCLIP4.28□□□□□ -1.721e-6■■□□□ 11.4
CNOT1-201ENST00000317147 PRSS3P35030 304 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 PPT1P50897 306 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 NKX2-5P52952 324 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-201ENST00000317147 HMGCS2P54868 508 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 C1QTNF8P60827 252 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 VLDLRP98155 873 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 OPCMLQ14982 345 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 FBXO48Q5FWF7 155 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 VN1R5Q7Z5H4 357 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 ARMC10Q8N2F6 343 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 NKAIN3Q8N8D7 197 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 NLGN2Q8NFZ4 835 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 MFSD8Q8NHS3 518 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 ACOT11Q8WXI4 607 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-201ENST00000317147 TREX2Q9BQ50 279 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-201ENST00000317147 TMEM175Q9BSA9 504 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 PLEKHA1Q9HB21 404 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 KCNIP2Q9NS61 270 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 PCDHB10Q9UN67 800 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 STRAPQ9Y3F4 350 aaKnown RBP4.28□□□□□ -1.72
CNOT1-201ENST00000317147 ABCA2Q9BZC7 2435 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 ZNF705EA8MWA4 302 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-201ENST00000317147 PSMD9O00233 223 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 ARPC5O15511 151 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 ALDH2P05091 517 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 MAP3K8P41279 467 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 CLCNKAP51800 687 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 ERVFC1P60507 584 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 OLIG2Q13516 323 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 PXDC1Q5TGL8 231 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 GPR139Q6DWJ6 353 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 C22orf42Q6IC83 251 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 TSSK4Q6SA08 328 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 CBLL1Q75N03 491 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 LURAP1LQ8IV03 231 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 YAF2Q8IY57 180 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 MFSD4AQ8N468 514 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 DUSP18Q8NEJ0 188 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 DNAAF1Q8NEP3 725 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 DUSP19Q8WTR2 217 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 CELF6Q96J87 481 aaKnown RBP4.28□□□□□ -1.72
CNOT1-201ENST00000317147 FEVQ99581 238 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 TMED9Q9BVK6 235 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 SLIRPQ9GZT3 109 aaKnown RBP4.28□□□□□ -1.72
CNOT1-201ENST00000317147 UBQLN3Q9H347 655 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 ZDHHC3Q9NYG2 299 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 CFAP97Q9P2B7 532 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 DKKL1Q9UK85 242 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 FLNBO75369 2602 aaKnown RBP4.28□□□□□ -1.72
CNOT1-201ENST00000317147 FN1P02751 2386 aaKnown RBP4.28□□□□□ -1.72
CNOT1-201ENST00000317147 ARGFXA6NJG6 315 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 E2F3O00716 465 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 MAGEB4O15481 346 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-201ENST00000317147 NUDT21O43809 227 aaKnown RBP4.28□□□□□ -1.72
CNOT1-201ENST00000317147 KCNK2O95069 426 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 SLC25A14O95258 325 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-201ENST00000317147 PLATP00750 562 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 SYPP08247 313 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 INSRRP14616 1297 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 CNR1P21554 472 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 SDHBP21912 280 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 MAT2AP31153 395 aaKnown RBP4.28□□□□□ -1.72
CNOT1-201ENST00000317147 CRYBB1P53674 252 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-201ENST00000317147 NOXRED1Q6NXP6 359 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 GOLGA7Q7Z5G4 137 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 CCDC71LQ8N9Z2 235 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 SLC43A3Q8NBI5 491 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 TMEM185AQ8NFB2 350 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 OR2AP1Q8NGE2 309 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 ASB17Q8WXJ9 295 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 PTP4A1Q93096 173 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 SAT2Q96F10 170 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-201ENST00000317147 RBM18Q96H35 190 aaKnown RBP4.28□□□□□ -1.72
CNOT1-201ENST00000317147 WRAP53Q9BUR4 548 aaKnown RBP4.28□□□□□ -1.72
CNOT1-201ENST00000317147 ADAM19Q9H013 955 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 LMAN1LQ9HAT1 526 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 NTN4Q9HB63 628 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 NKIRAS2Q9NYR9 191 aa4.28□□□□□ -1.72
CNOT1-201ENST00000317147 ADAM29Q9UKF5 820 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms