RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 DGLUCYQ7Z3D6 616 aa13□□□□□ -0.33
SPAST-201ENST00000315285 ZNF761Q86XN6 746 aaPredicted RBP13□□□□□ -0.33
SPAST-201ENST00000315285 MMP28Q9H239 520 aa13□□□□□ -0.33
SPAST-201ENST00000315285 PADI2Q9Y2J8 665 aa13□□□□□ -0.33
SPAST-201ENST00000315285 AP1G1O43747 822 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 HIST1H1TP22492 207 aaPredicted RBP12.99□□□□□ -0.33
SPAST-201ENST00000315285 RORAP35398 523 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 UGT2B10P36537 528 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 FAM26DQ5JW98 314 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 C1orf94Q6P1W5 598 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 RHOXF1Q8NHV9 184 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 CUEDC1Q9NWM3 386 aaPredicted RBP12.99□□□□□ -0.33
SPAST-201ENST00000315285 SIPA1L3O60292 1781 aaPredicted RBP12.99□□□□□ -0.33
SPAST-201ENST00000315285 TRAPPC6AO75865 159 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 HNRNPA2B1P22626 353 aaKnown RBP12.99□□□□□ -0.33
SPAST-201ENST00000315285 GBX1Q14549 363 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 TOR1AIP2Q8NFQ8 470 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 OR4C15Q8NGM1 316 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 SPRYD4Q8WW59 207 aaPredicted RBP12.99□□□□□ -0.33
SPAST-201ENST00000315285 ZMYND19Q96E35 227 aaPredicted RBP12.99□□□□□ -0.33
SPAST-201ENST00000315285 ZNF350Q9GZX5 532 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 DKKL1Q9UK85 242 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 GMEB2Q9UKD1 530 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 SSTR4P31391 388 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 GLP1RP43220 463 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 LMNTD1Q8N9Z9 388 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 OR5W2Q8NH69 310 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 RABL2AQ9UBK7 228 aaPredicted RBP12.99□□□□□ -0.33
SPAST-201ENST00000315285 NUFIP1Q9UHK0 495 aaKnown RBP12.99□□□□□ -0.33
SPAST-201ENST00000315285 RABL2BQ9UNT1 228 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 PIAS3Q9Y6X2 628 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 TEX13CA0A0J9YWL9 993 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 GPR89AB7ZAQ6 455 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 POLR1CO15160 346 aaPredicted RBP12.99□□□□□ -0.33
SPAST-201ENST00000315285 SEMA4FO95754 770 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 GPR89BP0CG08 455 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 CHMP24386 653 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 GRK5P34947 590 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 PITPNBP48739 271 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 ZNF91Q05481 1191 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 GRM7Q14831 915 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 TP53I3Q53FA7 332 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 SPIN3Q5JUX0 258 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 SH2D5Q6ZV89 423 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 ZER1Q7Z7L7 766 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 DNAJC22Q8N4W6 341 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 DPCDQ9BVM2 203 aaPredicted RBP12.99□□□□□ -0.33
SPAST-201ENST00000315285 ACSS1Q9NUB1 689 aaPredicted RBP12.99□□□□□ -0.33
SPAST-201ENST00000315285 CNTRLQ7Z7A1 2325 aa12.99□□□□□ -0.33
SPAST-201ENST00000315285 CYP17A1P05093 508 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 PVALBP20472 110 aaPredicted RBP12.98□□□□□ -0.33
SPAST-201ENST00000315285 DRD5P21918 477 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 LEXMQ3ZCV2 418 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 PIP5KL1Q5T9C9 394 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 CDS1Q92903 461 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 TREX2Q9BQ50 279 aaPredicted RBP12.98□□□□□ -0.33
SPAST-201ENST00000315285 ARL6Q9H0F7 186 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 OR10A4Q9H209 315 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 PPIL3Q9H2H8 161 aaKnown RBP12.98□□□□□ -0.33
SPAST-201ENST00000315285 DDX31Q9H8H2 851 aaKnown RBP12.98□□□□□ -0.33
SPAST-201ENST00000315285 ASB4Q9Y574 426 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 ENTPD2Q9Y5L3 495 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 TP53I11O14683 189 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 PHYHO14832 338 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 KCNK5O95279 499 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 CLUP10909 449 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 GDI2P50395 445 aaKnown RBP12.98□□□□□ -0.33
SPAST-201ENST00000315285 SNRPD2P62316 118 aaKnown RBP12.98□□□□□ -0.33
SPAST-201ENST00000315285 KIR2DS3Q14952 304 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 HES5Q5TA89 166 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 MAMDC2Q7Z304 686 aaPredicted RBP12.98□□□□□ -0.33
SPAST-201ENST00000315285 ADAMTS16Q8TE57 1224 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 SGCDQ92629 289 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 HOXD1Q9GZZ0 328 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 USP36Q9P275 1121 aaKnown RBP12.98□□□□□ -0.33
SPAST-201ENST00000315285 KLHL9Q9P2J3 617 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 PGAP2Q9UHJ9 254 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 DUX1O43812 170 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 LHCGRP22888 699 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 TM4SF4P48230 202 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 GIPRP48546 466 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 PARP16Q8N5Y8 322 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 SFXN5Q8TD22 340 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 ACTR10Q9NZ32 417 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 PPP4R1LQ9P1A2 415 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 SCML1Q9UN30 329 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 NPIPA5A0A0B4J1W7 369 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 WASHC1A8K0Z3 465 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 WASH3PC4AMC7 463 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 NPIPA7E9PJI5 369 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 TAPBPO15533 448 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 MMP2P08253 660 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 THEGLP0DJG4 465 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 NPIPA8P0DM63 369 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 TNFSF8P32971 234 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 RBMXP38159 391 aaKnown RBP12.98□□□□□ -0.33
SPAST-201ENST00000315285 HTR2BP41595 481 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 MLLT11Q13015 90 aaPredicted RBP12.98□□□□□ -0.33
SPAST-201ENST00000315285 XKR7Q5GH72 579 aa12.98□□□□□ -0.33
SPAST-201ENST00000315285 TMEM164Q5U3C3 297 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms