RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 SLC34A3Q8N130 599 aa20.65■□□□□ 0.9
CCDC85B-201ENST00000312579 APOBEC4Q8WW27 367 aaKnown RBP20.65■□□□□ 0.9
CCDC85B-201ENST00000312579 FIG4Q92562 907 aa20.65■□□□□ 0.9
CCDC85B-201ENST00000312579 ZNF354BQ96LW1 612 aa20.65■□□□□ 0.9
CCDC85B-201ENST00000312579 NSMCE2Q96MF7 247 aa20.65■□□□□ 0.9
CCDC85B-201ENST00000312579 ADOQ96SZ5 270 aa20.65■□□□□ 0.9
CCDC85B-201ENST00000312579 SDF2Q99470 211 aa20.65■□□□□ 0.9
CCDC85B-201ENST00000312579 FLRT3Q9NZU0 649 aa20.65■□□□□ 0.9
CCDC85B-201ENST00000312579 P2RX2Q9UBL9 471 aa20.65■□□□□ 0.9
CCDC85B-201ENST00000312579 YARS2Q9Y2Z4 477 aaKnown RBP20.65■□□□□ 0.9
CCDC85B-201ENST00000312579 PCDHGB3Q9Y5G1 929 aa20.65■□□□□ 0.9
CCDC85B-201ENST00000312579 ZZEF1O43149 2961 aa20.65■□□□□ 0.9
CCDC85B-201ENST00000312579 CXCR6O00574 342 aa20.64■□□□□ 0.9
CCDC85B-201ENST00000312579 H6PDO95479 791 aa20.64■□□□□ 0.9
CCDC85B-201ENST00000312579 ANPEPP15144 967 aa20.64■□□□□ 0.9
CCDC85B-201ENST00000312579 MAGEA8P43361 318 aa20.64■□□□□ 0.9
CCDC85B-201ENST00000312579 SSR4P51571 173 aa20.64■□□□□ 0.9
CCDC85B-201ENST00000312579 POLE2P56282 527 aa20.64■□□□□ 0.9
CCDC85B-201ENST00000312579 NRG3P56975 720 aa20.64■□□□□ 0.9
CCDC85B-201ENST00000312579 FBXW4P57775 412 aa20.64■□□□□ 0.9
CCDC85B-201ENST00000312579 CDK6Q00534 326 aa20.64■□□□□ 0.9
CCDC85B-201ENST00000312579 TBR1Q16650 682 aa20.64■□□□□ 0.9
CCDC85B-201ENST00000312579 CHDHQ8NE62 594 aaPredicted RBP20.64■□□□□ 0.9
CCDC85B-201ENST00000312579 FAM110BQ8TC76 370 aa20.64■□□□□ 0.9
CCDC85B-201ENST00000312579 SLC22A8Q8TCC7 542 aa20.64■□□□□ 0.9
CCDC85B-201ENST00000312579 EXTL1Q92935 676 aa20.64■□□□□ 0.9
CCDC85B-201ENST00000312579 TMEM38AQ9H6F2 299 aa20.64■□□□□ 0.9
CCDC85B-201ENST00000312579 PLA2G3Q9NZ20 509 aa20.64■□□□□ 0.9
CCDC85B-201ENST00000312579 MKLN1Q9UL63 735 aa20.64■□□□□ 0.9
CCDC85B-201ENST00000312579 AGR2O95994 175 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 AQP1P29972 269 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 SESN3P58005 492 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 TXNL4AP83876 142 aaKnown RBP20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 CHRNEQ04844 493 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 SLC34A1Q06495 639 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 SCARB2Q14108 478 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 DECR1Q16698 335 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 VMACQ2NL98 169 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 MTX3Q5HYI7 312 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 CRB2Q5IJ48 1285 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 ABHD17BQ5VST6 288 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 AGAP7PQ5VUJ5 663 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 IL20RBQ6UXL0 311 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 PACS2Q86VP3 889 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 GOLM1Q8NBJ4 401 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 C11orf65Q8NCR3 313 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 AGAP4Q96P64 663 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 H3BNX3 289 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 TSPAN2O60636 221 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 UGT2B11O75310 529 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 CEACAM4O75871 244 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 IL33O95760 270 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 RNF144AP50876 292 aaPredicted RBP20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 BORAQ6PGQ7 559 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 TMEM156Q8N614 296 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 ASB15Q8WXK1 588 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 FAM162AQ96A26 154 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 ZG16BQ96DA0 208 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 DUS3LQ96G46 650 aaKnown RBP20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 CNTNAP3BQ96NU0 1288 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 CNTNAP3Q9BZ76 1288 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 QRSL1Q9H0R6 528 aaKnown RBP20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 GORASP2Q9H8Y8 452 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 THUMPD1Q9NXG2 353 aaKnown RBP20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 STOML1Q9UBI4 398 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 TEKT2Q9UIF3 430 aa20.63■□□□□ 0.89
CCDC85B-201ENST00000312579 ACACBO00763 2458 aa20.62■□□□□ 0.89
CCDC85B-201ENST00000312579 DHRS12A0PJE2 317 aa20.62■□□□□ 0.89
CCDC85B-201ENST00000312579 PPM1BO75688 479 aa20.62■□□□□ 0.89
CCDC85B-201ENST00000312579 FBXO45P0C2W1 286 aa20.62■□□□□ 0.89
CCDC85B-201ENST00000312579 CYP4B1P13584 511 aa20.62■□□□□ 0.89
CCDC85B-201ENST00000312579 PSMA4P25789 261 aaKnown RBP20.62■□□□□ 0.89
CCDC85B-201ENST00000312579 IL12BP29460 328 aa20.62■□□□□ 0.89
CCDC85B-201ENST00000312579 GPR68Q15743 365 aa20.62■□□□□ 0.89
CCDC85B-201ENST00000312579 ZNF630Q2M218 657 aaPredicted RBP20.62■□□□□ 0.89
CCDC85B-201ENST00000312579 TYW3Q6IPR3 259 aaKnown RBP20.62■□□□□ 0.89
CCDC85B-201ENST00000312579 C19orf48Q6RUI8 117 aa20.62■□□□□ 0.89
CCDC85B-201ENST00000312579 ISLR2Q6UXK2 745 aa20.62■□□□□ 0.89
CCDC85B-201ENST00000312579 FRRS1Q6ZNA5 592 aa20.62■□□□□ 0.89
CCDC85B-201ENST00000312579 SNRNP27Q8WVK2 155 aaKnown RBP20.62■□□□□ 0.89
CCDC85B-201ENST00000312579 DIO2Q92813 273 aa20.62■□□□□ 0.89
CCDC85B-201ENST00000312579 TRNT1Q96Q11 434 aaKnown RBP20.62■□□□□ 0.89
CCDC85B-201ENST00000312579 ZNF350Q9GZX5 532 aa20.62■□□□□ 0.89
CCDC85B-201ENST00000312579 SLC38A1Q9H2H9 487 aa20.62■□□□□ 0.89
CCDC85B-201ENST00000312579 LIPT1Q9Y234 373 aa20.62■□□□□ 0.89
CCDC85B-201ENST00000312579 TPRP12270 2363 aaKnown RBP20.62■□□□□ 0.89
CCDC85B-201ENST00000312579 CENPVL1A0A0U1RR11 272 aa20.61■□□□□ 0.89
CCDC85B-201ENST00000312579 TCRBV5S2A0A599 114 aa20.61■□□□□ 0.89
CCDC85B-201ENST00000312579 C5orf58C9J3I9 102 aa20.61■□□□□ 0.89
CCDC85B-201ENST00000312579 STX11O75558 287 aa20.61■□□□□ 0.89
CCDC85B-201ENST00000312579 GCM2O75603 506 aaPredicted RBP20.61■□□□□ 0.89
CCDC85B-201ENST00000312579 WDPCPO95876 746 aa20.61■□□□□ 0.89
CCDC85B-201ENST00000312579 GPIP06744 558 aa20.61■□□□□ 0.89
CCDC85B-201ENST00000312579 SLC7A1P30825 629 aa20.61■□□□□ 0.89
CCDC85B-201ENST00000312579 PCGF2P35227 344 aa20.61■□□□□ 0.89
CCDC85B-201ENST00000312579 KRT20P35900 424 aa20.61■□□□□ 0.89
CCDC85B-201ENST00000312579 ZNF791Q3KP31 576 aaPredicted RBP20.61■□□□□ 0.89
CCDC85B-201ENST00000312579 SLC15A4Q8N697 577 aa20.61■□□□□ 0.89
CCDC85B-201ENST00000312579 OR10G3Q8NGC4 313 aa20.61■□□□□ 0.89
CCDC85B-201ENST00000312579 SPACA9Q96E40 222 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms