RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 GNG8Q9UK08 70 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 IGLON5A6NGN9 336 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 SIX3O95343 332 aaPredicted RBP8.35□□□□□ -1.07
COL6A5-202ENST00000312481 MPEG1Q2M385 716 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 ITPRIPL2Q3MIP1 535 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 MCEMP1Q8IX19 187 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 CFAP52Q8N1V2 620 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 OR2L2Q8NH16 312 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 ASB11Q8WXH4 323 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 GAL3ST3Q96A11 431 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 ALG8Q9BVK2 526 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 MGAT4CQ9UBM8 478 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 EVLQ9UI08 416 aaPredicted RBP8.35□□□□□ -1.07
COL6A5-202ENST00000312481 PSORS1C1Q9UIG5 152 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 RBM7Q9Y580 266 aaKnown RBP8.35□□□□□ -1.07
COL6A5-202ENST00000312481 CDC7O00311 574 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 DLSTP36957 453 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 ZNF133P52736 654 aaPredicted RBP8.35□□□□□ -1.07
COL6A5-202ENST00000312481 VLDLRP98155 873 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 SEMA3BQ13214 749 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 DYRK1AQ13627 763 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 PSAPL1Q6NUJ1 521 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 ANKRD54Q6NXT1 300 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 OR2L13Q8N349 312 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 OR5T3Q8NGG3 340 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 JAM3Q9BX67 310 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 CERS4Q9HA82 394 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 CTPS2Q9NRF8 586 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 C1GALT1Q9NS00 363 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 PAQR5Q9NXK6 330 aaPredicted RBP8.35□□□□□ -1.07
COL6A5-202ENST00000312481 CORINQ9Y5Q5 1042 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 KIF26AQ9ULI4 1882 aaPredicted RBP8.35□□□□□ -1.07
COL6A5-202ENST00000312481 SRPX2O60687 465 aaPredicted RBP8.35□□□□□ -1.07
COL6A5-202ENST00000312481 IFNA5P01569 189 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 C1QBP02746 253 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 ARAFP10398 606 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 TFPIP10646 304 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 RNASE10Q5GAN6 216 aaKnown RBP8.35□□□□□ -1.07
COL6A5-202ENST00000312481 ANKK1Q8NFD2 765 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 DUSP21Q9H596 190 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 IL17CQ9P0M4 197 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 FARSAQ9Y285 508 aaKnown RBP8.35□□□□□ -1.07
COL6A5-202ENST00000312481 TBC1D3DA0A087WVF3 549 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 TBC1D3IA0A087WXS9 549 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 TBC1D3EA0A087X179 549 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 TCRBV5S1A1TA0A578 114 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 TBC1D3LB9A6J9 549 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 H7BY64 318 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 LDB2O43679 373 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 GPR32O75388 356 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 TFP02787 698 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 TBC1D3HP0C7X1 549 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 GGT5P36269 586 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 OPRD1P41143 372 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 TBPL1P62380 186 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 PUM1Q14671 1186 aaKnown RBP eCLIP8.35□□□□□ -1.07
COL6A5-202ENST00000312481 TBC1D3CQ6IPX1 549 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 IGFN1Q86VF2 1251 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 TBC1D3Q8IZP1 549 aaPredicted RBP8.35□□□□□ -1.07
COL6A5-202ENST00000312481 UPRTQ96BW1 309 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 SULT4A1Q9BR01 284 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 ZNF416Q9BWM5 594 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 VILLO15195 856 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 ZNF780AO75290 641 aaPredicted RBP8.35□□□□□ -1.07
COL6A5-202ENST00000312481 ZNF14P17017 642 aaPredicted RBP8.35□□□□□ -1.07
COL6A5-202ENST00000312481 HTR2BP41595 481 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 DNASE1L3Q13609 305 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 CDK10Q15131 360 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 LTB4RQ15722 352 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 TATDN3Q17R31 274 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 CEACAM19Q7Z692 300 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 TMEM102Q8N9M5 508 aaPredicted RBP8.35□□□□□ -1.07
COL6A5-202ENST00000312481 RSPRY1Q96DX4 576 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 AMDHD1Q96NU7 426 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 SORCS2Q96PQ0 1159 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 SACM1LQ9NTJ5 587 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 ZNF736B4DX44 427 aaPredicted RBP8.35□□□□□ -1.07
COL6A5-202ENST00000312481 OLFM2O95897 454 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 SP2Q02086 613 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 SLC51BQ86UW2 128 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 KDM8Q8N371 416 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 NLGN2Q8NFZ4 835 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 OR10G6Q8NH81 332 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 C16orf58Q96GQ5 468 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 KLK8O60259 260 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 EPHX1P07099 455 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 RAB33AQ14088 237 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 ERN2Q76MJ5 926 aaKnown RBP8.34□□□□□ -1.07
COL6A5-202ENST00000312481 COMMD6Q7Z4G1 85 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 SLC51AQ86UW1 340 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 OR5D14Q8NGL3 314 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 RNF11Q9Y3C5 154 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 HELZP42694 1942 aaKnown RBP8.34□□□□□ -1.07
COL6A5-202ENST00000312481 BRWD3Q6RI45 1802 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 ZNF840PA6NDX5 716 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 GABARAPH6UMI1 98 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 PMS2P2O95744 297 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 HTR1FP30939 366 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 THBS2P35442 1172 aa8.34□□□□□ -1.07
COL6A5-202ENST00000312481 ZNF252P-AS1Q0IIN9 211 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms