RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 NXF5Q9H1B4 397 aaKnown RBP20.86■□□□□ 0.93
IRF3-201ENST00000309877 KIF26BQ2KJY2 2108 aa20.85■□□□□ 0.93
IRF3-201ENST00000309877 FRG2CA6NGY1 282 aa20.85■□□□□ 0.93
IRF3-201ENST00000309877 PEX12O00623 359 aa20.85■□□□□ 0.93
IRF3-201ENST00000309877 DLGAP3O95886 979 aa20.85■□□□□ 0.93
IRF3-201ENST00000309877 EPPINO95925 133 aa20.85■□□□□ 0.93
IRF3-201ENST00000309877 CSRP1P21291 193 aaKnown RBP20.85■□□□□ 0.93
IRF3-201ENST00000309877 RPS4Y1P22090 263 aaKnown RBP20.85■□□□□ 0.93
IRF3-201ENST00000309877 EIPR1Q53HC9 387 aa20.85■□□□□ 0.93
IRF3-201ENST00000309877 ZAR1Q86SH2 424 aa20.85■□□□□ 0.93
IRF3-201ENST00000309877 RBM45Q8IUH3 476 aaKnown RBP20.85■□□□□ 0.93
IRF3-201ENST00000309877 LACC1Q8IV20 430 aa20.85■□□□□ 0.93
IRF3-201ENST00000309877 OR4D11Q8NGI4 311 aa20.85■□□□□ 0.93
IRF3-201ENST00000309877 MAGEE2Q8TD90 523 aaPredicted RBP20.85■□□□□ 0.93
IRF3-201ENST00000309877 ADIPOR1Q96A54 375 aa20.85■□□□□ 0.93
IRF3-201ENST00000309877 C8orf44Q96CB5 159 aa20.85■□□□□ 0.93
IRF3-201ENST00000309877 ZNF597Q96LX8 424 aa20.85■□□□□ 0.93
IRF3-201ENST00000309877 EPYCQ99645 322 aa20.85■□□□□ 0.93
IRF3-201ENST00000309877 MESP1Q9BRJ9 268 aa20.85■□□□□ 0.93
IRF3-201ENST00000309877 MAGED1Q9Y5V3 778 aaPredicted RBP20.85■□□□□ 0.93
IRF3-201ENST00000309877 TNFRSF11BO00300 401 aa20.84■□□□□ 0.93
IRF3-201ENST00000309877 PRKNO60260 465 aaPredicted RBP20.84■□□□□ 0.93
IRF3-201ENST00000309877 KLF7O75840 302 aaPredicted RBP20.84■□□□□ 0.93
IRF3-201ENST00000309877 SEC24DO94855 1032 aaPredicted RBP20.84■□□□□ 0.93
IRF3-201ENST00000309877 ACADSP16219 412 aa20.84■□□□□ 0.93
IRF3-201ENST00000309877 FOLR3P41439 243 aa20.84■□□□□ 0.93
IRF3-201ENST00000309877 GPR143P51810 404 aa20.84■□□□□ 0.93
IRF3-201ENST00000309877 TARDBPQ13148 414 aaKnown RBP eCLIP20.84■□□□□ 0.932e-6■■■■□ 22.3
IRF3-201ENST00000309877 MAPK14Q16539 360 aa20.84■□□□□ 0.93
IRF3-201ENST00000309877 FAM69BQ5VUD6 431 aa20.84■□□□□ 0.93
IRF3-201ENST00000309877 ZNF836Q6ZNA1 936 aa20.84■□□□□ 0.93
IRF3-201ENST00000309877 ASCL5Q7RTU5 278 aa20.84■□□□□ 0.93
IRF3-201ENST00000309877 CLIP4Q8N3C7 705 aa20.84■□□□□ 0.93
IRF3-201ENST00000309877 NFAM1Q8NET5 270 aaPredicted RBP20.84■□□□□ 0.93
IRF3-201ENST00000309877 OR2Y1Q8NGV0 311 aa20.84■□□□□ 0.93
IRF3-201ENST00000309877 NRBF2Q96F24 287 aa20.84■□□□□ 0.93
IRF3-201ENST00000309877 ARHGDIGQ99819 225 aa20.84■□□□□ 0.93
IRF3-201ENST00000309877 WFDC6Q9BQY6 131 aa20.84■□□□□ 0.93
IRF3-201ENST00000309877 WWTR1Q9GZV5 400 aa20.84■□□□□ 0.93
IRF3-201ENST00000309877 ARMC7Q9H6L4 198 aa20.84■□□□□ 0.93
IRF3-201ENST00000309877 MRTO4Q9UKD2 239 aaKnown RBP20.84■□□□□ 0.93
IRF3-201ENST00000309877 UGT2B17O75795 530 aa20.83■□□□□ 0.93
IRF3-201ENST00000309877 CDH12P55289 794 aa20.83■□□□□ 0.93
IRF3-201ENST00000309877 DAG1Q14118 895 aa20.83■□□□□ 0.93
IRF3-201ENST00000309877 GANABQ14697 944 aaKnown RBP20.83■□□□□ 0.93
IRF3-201ENST00000309877 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.83■□□□□ 0.93
IRF3-201ENST00000309877 TCTN3Q6NUS6 607 aa20.83■□□□□ 0.93
IRF3-201ENST00000309877 TIPARPQ7Z3E1 657 aaKnown RBP20.83■□□□□ 0.93
IRF3-201ENST00000309877 HS3ST5Q8IZT8 346 aa20.83■□□□□ 0.93
IRF3-201ENST00000309877 ZSCAN1Q8NBB4 408 aa20.83■□□□□ 0.93
IRF3-201ENST00000309877 OR6T1Q8NGN1 323 aa20.83■□□□□ 0.93
IRF3-201ENST00000309877 WDR77Q9BQA1 342 aaPredicted RBP20.83■□□□□ 0.93
IRF3-201ENST00000309877 SEMA4CQ9C0C4 833 aa20.83■□□□□ 0.93
IRF3-201ENST00000309877 FOXJ2Q9P0K8 574 aa20.83■□□□□ 0.93
IRF3-201ENST00000309877 KCNE5Q9UJ90 142 aa20.83■□□□□ 0.93
IRF3-201ENST00000309877 CENPVL1A0A0U1RR11 272 aa20.83■□□□□ 0.92
IRF3-201ENST00000309877 C7orf72A4D263 438 aa20.83■□□□□ 0.92
IRF3-201ENST00000309877 TNFSF15O95150 251 aa20.83■□□□□ 0.92
IRF3-201ENST00000309877 UMODP07911 640 aa20.83■□□□□ 0.92
IRF3-201ENST00000309877 NID1P14543 1247 aa20.83■□□□□ 0.92
IRF3-201ENST00000309877 ALDH3A2P51648 485 aa20.83■□□□□ 0.92
IRF3-201ENST00000309877 NR0B1P51843 470 aaKnown RBP20.83■□□□□ 0.92
IRF3-201ENST00000309877 PSMD4P55036 377 aaKnown RBP20.83■□□□□ 0.92
IRF3-201ENST00000309877 EEF1A1P68104 462 aaKnown RBP20.83■□□□□ 0.92
IRF3-201ENST00000309877 HSDL2Q6YN16 418 aa20.83■□□□□ 0.92
IRF3-201ENST00000309877 ZNF614Q8N883 585 aa20.83■□□□□ 0.92
IRF3-201ENST00000309877 OR52J3Q8NH60 311 aa20.83■□□□□ 0.92
IRF3-201ENST00000309877 VMP1Q96GC9 406 aa20.83■□□□□ 0.92
IRF3-201ENST00000309877 NAF1Q96HR8 494 aaKnown RBP20.83■□□□□ 0.92
IRF3-201ENST00000309877 RBM4BQ9BQ04 359 aaKnown RBP20.83■□□□□ 0.92
IRF3-201ENST00000309877 RBM4Q9BWF3 364 aaKnown RBP20.83■□□□□ 0.92
IRF3-201ENST00000309877 SPRY4Q9C004 299 aa20.83■□□□□ 0.92
IRF3-201ENST00000309877 RLIMQ9NVW2 624 aa20.83■□□□□ 0.92
IRF3-201ENST00000309877 PPIEQ9UNP9 301 aaKnown RBP20.83■□□□□ 0.92
IRF3-201ENST00000309877 CHST2Q9Y4C5 530 aa20.83■□□□□ 0.92
IRF3-201ENST00000309877 PCDHGA10Q9Y5H3 936 aa20.83■□□□□ 0.92
IRF3-201ENST00000309877 LYVE1Q9Y5Y7 322 aa20.83■□□□□ 0.92
IRF3-201ENST00000309877 EP300Q09472 2414 aaPredicted RBP20.82■□□□□ 0.92
IRF3-201ENST00000309877 CLDN24A6NM45 220 aa20.82■□□□□ 0.92
IRF3-201ENST00000309877 GADD45GO95257 159 aa20.82■□□□□ 0.92
IRF3-201ENST00000309877 UQCRBP14927 111 aa20.82■□□□□ 0.92
IRF3-201ENST00000309877 TCN2P20062 427 aa20.82■□□□□ 0.92
IRF3-201ENST00000309877 PRKACGP22612 351 aa20.82■□□□□ 0.92
IRF3-201ENST00000309877 RGS8P57771 180 aaPredicted RBP20.82■□□□□ 0.92
IRF3-201ENST00000309877 WLSQ5T9L3 541 aa20.82■□□□□ 0.92
IRF3-201ENST00000309877 ZNF605Q86T29 641 aa20.82■□□□□ 0.92
IRF3-201ENST00000309877 TMPRSS12Q86WS5 348 aa20.82■□□□□ 0.92
IRF3-201ENST00000309877 APCDD1LQ8NCL9 501 aa20.82■□□□□ 0.92
IRF3-201ENST00000309877 CT55Q8WUE5 264 aa20.82■□□□□ 0.92
IRF3-201ENST00000309877 PHOX2BQ99453 314 aa20.82■□□□□ 0.92
IRF3-201ENST00000309877 NRSN2Q9GZP1 204 aa20.82■□□□□ 0.92
IRF3-201ENST00000309877 Q9H521 79 aa20.82■□□□□ 0.92
IRF3-201ENST00000309877 PDP1Q9P0J1 537 aaPredicted RBP20.82■□□□□ 0.92
IRF3-201ENST00000309877 RHCGQ9UBD6 479 aa20.82■□□□□ 0.92
IRF3-201ENST00000309877 RAB26Q9ULW5 256 aa20.82■□□□□ 0.92
IRF3-201ENST00000309877 PCNX2A6NKB5 2137 aa20.82■□□□□ 0.92
IRF3-201ENST00000309877 PCDH17O14917 1159 aa20.81■□□□□ 0.92
IRF3-201ENST00000309877 IL33O95760 270 aa20.81■□□□□ 0.92
IRF3-201ENST00000309877 HPRP00739 348 aa20.81■□□□□ 0.92
IRF3-201ENST00000309877 RAB40ALP0C0E4 278 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms