RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 PEX12O00623 359 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 SNPHO15079 494 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 ARF3P61204 181 aaPredicted RBP10.79□□□□□ -0.68
PTPN2-201ENST00000309660 DESI1Q6ICB0 168 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 SLC36A4Q6YBV0 504 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 FAM26EQ8N5C1 309 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 MRPL38Q96DV4 380 aaKnown RBP10.79□□□□□ -0.68
PTPN2-201ENST00000309660 SAMD8Q96LT4 415 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 OR2A5Q96R48 311 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 TMED9Q9BVK6 235 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 BARHL1Q9BZE3 327 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 DPH1Q9BZG8 443 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 DAPP1Q9UN19 280 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 NDRG2Q9UN36 371 aaKnown RBP10.79□□□□□ -0.68
PTPN2-201ENST00000309660 STUB1Q9UNE7 303 aa10.79□□□□□ -0.68
PTPN2-201ENST00000309660 RBMX2Q9Y388 322 aaKnown RBP10.79□□□□□ -0.68
PTPN2-201ENST00000309660 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 GNB5O14775 395 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 HYAL3O43820 417 aaPredicted RBP10.78□□□□□ -0.68
PTPN2-201ENST00000309660 KCNJ13O60928 360 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 SOX18P35713 384 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 GCGRP47871 477 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 RORCP51449 518 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 KLHL12Q53G59 568 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 TMPRSS11AQ6ZMR5 421 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 FRRS1Q6ZNA5 592 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 GDF7Q7Z4P5 450 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 TAF8Q7Z7C8 310 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 OR13H1Q8NG92 308 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 TMEM163Q8TC26 289 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 GRHL3Q8TE85 626 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 DIO2Q92813 273 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 GIMAP5Q96F15 307 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 CDCA3Q99618 268 aaPredicted RBP10.78□□□□□ -0.68
PTPN2-201ENST00000309660 GABRG3Q99928 467 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 TAPBPLQ9BX59 468 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 ABCB9Q9NP78 766 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 CRNNQ9UBG3 495 aaPredicted RBP10.78□□□□□ -0.68
PTPN2-201ENST00000309660 PHF11Q9UIL8 331 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 ZNF443Q9Y2A4 671 aaPredicted RBP10.78□□□□□ -0.68
PTPN2-201ENST00000309660 LSM2Q9Y333 95 aaKnown RBP10.78□□□□□ -0.68
PTPN2-201ENST00000309660 SLC35F4A4IF30 521 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 URADA6NGE7 173 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 SNTNA6NMZ2 147 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 SGK494L7N484 410 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 PRODHO43272 600 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 FGF17O60258 216 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 SLITRK5O94991 958 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 APOA1P02647 267 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 CRYBB2P43320 205 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 DEFA1P59665 94 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 DEFA3P59666 94 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 RPS7P62081 194 aaKnown RBP10.78□□□□□ -0.68
PTPN2-201ENST00000309660 RPS25P62851 125 aaKnown RBP10.78□□□□□ -0.68
PTPN2-201ENST00000309660 CDK5Q00535 292 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.78□□□□□ -0.68
PTPN2-201ENST00000309660 TSPAN31Q12999 210 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 NNATQ16517 81 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 MAPK14Q16539 360 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 OCLNQ16625 522 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 TMEM201Q5SNT2 666 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 FCRLBQ6BAA4 426 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 CCBE1Q6UXH8 406 aaPredicted RBP10.78□□□□□ -0.68
PTPN2-201ENST00000309660 GATAD2AQ86YP4 633 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 ZFPM2Q8WW38 1151 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 TM9SF4Q92544 642 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 C10orf90Q96M02 699 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 ZFYVE21Q9BQ24 234 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 MED20Q9H944 212 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 POLMQ9NP87 494 aaPredicted RBP10.78□□□□□ -0.68
PTPN2-201ENST00000309660 MAT2BQ9NZL9 334 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 MALT1Q9UDY8 824 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 PAIP2BQ9ULR5 123 aaKnown RBP10.78□□□□□ -0.68
PTPN2-201ENST00000309660 ZC3H12DA2A288 527 aaKnown RBP10.78□□□□□ -0.68
PTPN2-201ENST00000309660 TFECO14948 347 aaPredicted RBP10.78□□□□□ -0.68
PTPN2-201ENST00000309660 CPMP14384 443 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 CELP19835 753 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 SDC2P34741 201 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 ZNF181Q2M3W8 571 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 KLHL22Q53GT1 634 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 ZNF836Q6ZNA1 936 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 LINC00471Q8N535 108 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 CAMKVQ8NCB2 501 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 TMEM52Q8NDY8 209 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 OR51G2Q8NGK0 314 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 TEX12Q9BXU0 123 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 HDHD5Q9BXW7 423 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 ATP13A2Q9NQ11 1180 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 CLEC1BQ9P126 229 aa10.78□□□□□ -0.68
PTPN2-201ENST00000309660 OR2W5A6NFC9 320 aa10.77□□□□□ -0.68
PTPN2-201ENST00000309660 CDC42EP2O14613 210 aa10.77□□□□□ -0.68
PTPN2-201ENST00000309660 SAGP10523 405 aaPredicted RBP10.77□□□□□ -0.68
PTPN2-201ENST00000309660 ACP2P11117 423 aa10.77□□□□□ -0.68
PTPN2-201ENST00000309660 SSTR4P31391 388 aa10.77□□□□□ -0.68
PTPN2-201ENST00000309660 LSSP48449 732 aa10.77□□□□□ -0.68
PTPN2-201ENST00000309660 NKX2-5P52952 324 aaPredicted RBP10.77□□□□□ -0.68
PTPN2-201ENST00000309660 WNT4P56705 351 aa10.77□□□□□ -0.68
PTPN2-201ENST00000309660 PRKCDQ05655 676 aa10.77□□□□□ -0.68
PTPN2-201ENST00000309660 MLLT11Q13015 90 aaPredicted RBP10.77□□□□□ -0.68
PTPN2-201ENST00000309660 KIR2DS3Q14952 304 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms