RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 GXYLT2A0PJZ3 443 aa17.67■□□□□ 0.42
LIME1-201ENST00000309546 A6NNC1 897 aa17.67■□□□□ 0.42
LIME1-201ENST00000309546 LSM1O15116 133 aaKnown RBP17.67■□□□□ 0.42
LIME1-201ENST00000309546 GMFGO60234 142 aa17.67■□□□□ 0.42
LIME1-201ENST00000309546 RCBTB2O95199 551 aa17.67■□□□□ 0.42
LIME1-201ENST00000309546 KCNH1O95259 989 aa17.67■□□□□ 0.42
LIME1-201ENST00000309546 IL33O95760 270 aa17.67■□□□□ 0.42
LIME1-201ENST00000309546 PRPS2P11908 318 aa17.67■□□□□ 0.42
LIME1-201ENST00000309546 FBXW10Q5XX13 1052 aa17.67■□□□□ 0.42
LIME1-201ENST00000309546 ZCCHC23Q6ZST2 131 aa17.67■□□□□ 0.42
LIME1-201ENST00000309546 CHMP1BQ7LBR1 199 aa17.67■□□□□ 0.42
LIME1-201ENST00000309546 ADGRE4PQ86SQ3 457 aa17.67■□□□□ 0.42
LIME1-201ENST00000309546 MARCH3Q86UD3 253 aa17.67■□□□□ 0.42
LIME1-201ENST00000309546 OR5M1Q8NGP8 315 aa17.67■□□□□ 0.42
LIME1-201ENST00000309546 GPR151Q8TDV0 419 aa17.67■□□□□ 0.42
LIME1-201ENST00000309546 ZBED6CLQ96FA7 236 aaPredicted RBP17.67■□□□□ 0.42
LIME1-201ENST00000309546 ZFP3Q96NJ6 502 aa17.67■□□□□ 0.42
LIME1-201ENST00000309546 RBM24Q9BX46 236 aaKnown RBP17.67■□□□□ 0.42
LIME1-201ENST00000309546 TBL1XR1Q9BZK7 514 aa17.67■□□□□ 0.42
LIME1-201ENST00000309546 RTN4RQ9BZR6 473 aa17.67■□□□□ 0.42
LIME1-201ENST00000309546 ACBD3Q9H3P7 528 aa17.67■□□□□ 0.42
LIME1-201ENST00000309546 PTGES2Q9H7Z7 377 aa17.67■□□□□ 0.42
LIME1-201ENST00000309546 EML4Q9HC35 981 aaKnown RBP17.67■□□□□ 0.42
LIME1-201ENST00000309546 RASSF1Q9NS23 344 aa17.67■□□□□ 0.42
LIME1-201ENST00000309546 CELSR1Q9NYQ6 3014 aa17.66■□□□□ 0.42
LIME1-201ENST00000309546 MED13LQ71F56 2210 aa17.66■□□□□ 0.42
LIME1-201ENST00000309546 PIP5K1BO14986 540 aa17.66■□□□□ 0.42
LIME1-201ENST00000309546 NPHS1O60500 1241 aa17.66■□□□□ 0.42
LIME1-201ENST00000309546 UTS2O95399 124 aa17.66■□□□□ 0.42
LIME1-201ENST00000309546 NUDT17P0C025 328 aa17.66■□□□□ 0.42
LIME1-201ENST00000309546 EFNA1P20827 205 aaPredicted RBP17.66■□□□□ 0.42
LIME1-201ENST00000309546 MANFP55145 182 aaKnown RBP17.66■□□□□ 0.42
LIME1-201ENST00000309546 B3GALT5-AS1P59052 145 aa17.66■□□□□ 0.42
LIME1-201ENST00000309546 GANABQ14697 944 aaKnown RBP17.66■□□□□ 0.42
LIME1-201ENST00000309546 ARL13AQ5H913 290 aaPredicted RBP17.66■□□□□ 0.42
LIME1-201ENST00000309546 SPNS3Q6ZMD2 512 aa17.66■□□□□ 0.42
LIME1-201ENST00000309546 RNF165Q6ZSG1 346 aa17.66■□□□□ 0.42
LIME1-201ENST00000309546 GALNT10Q86SR1 603 aa17.66■□□□□ 0.42
LIME1-201ENST00000309546 MEIOBQ8N635 442 aa17.66■□□□□ 0.42
LIME1-201ENST00000309546 NUP43Q8NFH3 380 aa17.66■□□□□ 0.42
LIME1-201ENST00000309546 GOT1L1Q8NHS2 421 aaPredicted RBP17.66■□□□□ 0.42
LIME1-201ENST00000309546 LINC01560Q8TB33 94 aa17.66■□□□□ 0.42
LIME1-201ENST00000309546 TCP10LQ8TDR4 215 aa17.66■□□□□ 0.42
LIME1-201ENST00000309546 DUSP19Q8WTR2 217 aa17.66■□□□□ 0.42
LIME1-201ENST00000309546 SLC9A6Q92581 669 aa17.66■□□□□ 0.42
LIME1-201ENST00000309546 JKAMPQ9P055 326 aa17.66■□□□□ 0.42
LIME1-201ENST00000309546 GIMAP2Q9UG22 337 aa17.66■□□□□ 0.42
LIME1-201ENST00000309546 TMED5Q9Y3A6 229 aa17.66■□□□□ 0.42
LIME1-201ENST00000309546 TRAF6Q9Y4K3 522 aa17.66■□□□□ 0.42
LIME1-201ENST00000309546 TTC36A6NLP5 189 aa17.65■□□□□ 0.42
LIME1-201ENST00000309546 H3BML4 177 aa17.65■□□□□ 0.42
LIME1-201ENST00000309546 SEC14L5O43304 696 aa17.65■□□□□ 0.42
LIME1-201ENST00000309546 TGM6O95932 706 aa17.65■□□□□ 0.42
LIME1-201ENST00000309546 IGKV1D-16P01601 117 aa17.65■□□□□ 0.42
LIME1-201ENST00000309546 IFI6P09912 130 aa17.65■□□□□ 0.42
LIME1-201ENST00000309546 PEPDP12955 493 aa17.65■□□□□ 0.42
LIME1-201ENST00000309546 IST1P53990 364 aa17.65■□□□□ 0.42
LIME1-201ENST00000309546 PDE7AQ13946 482 aa17.65■□□□□ 0.42
LIME1-201ENST00000309546 GRAMD1BQ3KR37 738 aa17.65■□□□□ 0.42
LIME1-201ENST00000309546 VPS26BQ4G0F5 336 aa17.65■□□□□ 0.42
LIME1-201ENST00000309546 SMPDL3BQ92485 455 aa17.65■□□□□ 0.42
LIME1-201ENST00000309546 ZNF764Q96H86 408 aaPredicted RBP17.65■□□□□ 0.42
LIME1-201ENST00000309546 MS4A4EQ96PG1 132 aa17.65■□□□□ 0.42
LIME1-201ENST00000309546 UCN2Q96RP3 112 aa17.65■□□□□ 0.42
LIME1-201ENST00000309546 LIME1Q9H400 295 aa17.65■□□□□ 0.42
LIME1-201ENST00000309546 GALNT8Q9NY28 637 aa17.65■□□□□ 0.42
LIME1-201ENST00000309546 LGALS13Q9UHV8 139 aa17.65■□□□□ 0.42
LIME1-201ENST00000309546 AKAP6Q13023 2319 aa17.64■□□□□ 0.41
LIME1-201ENST00000309546 HCRTR2O43614 444 aa17.64■□□□□ 0.41
LIME1-201ENST00000309546 TBX19O60806 448 aa17.64■□□□□ 0.41
LIME1-201ENST00000309546 ANGPTL1O95841 491 aa17.64■□□□□ 0.41
LIME1-201ENST00000309546 BCKDHAP12694 445 aa17.64■□□□□ 0.41
LIME1-201ENST00000309546 CD1EP15812 388 aa17.64■□□□□ 0.41
LIME1-201ENST00000309546 CPOXP36551 454 aa17.64■□□□□ 0.41
LIME1-201ENST00000309546 HPCAL1P37235 193 aa17.64■□□□□ 0.41
LIME1-201ENST00000309546 ASMTP46597 345 aa17.64■□□□□ 0.41
LIME1-201ENST00000309546 SORDQ00796 357 aa17.64■□□□□ 0.41
LIME1-201ENST00000309546 EXOC3L1Q86VI1 746 aa17.64■□□□□ 0.41
LIME1-201ENST00000309546 CDC20BQ86Y33 519 aa17.64■□□□□ 0.41
LIME1-201ENST00000309546 CDRT4Q8N9R6 151 aa17.64■□□□□ 0.41
LIME1-201ENST00000309546 CEP70Q8NHQ1 597 aa17.64■□□□□ 0.41
LIME1-201ENST00000309546 JADE3Q92613 823 aa17.64■□□□□ 0.41
LIME1-201ENST00000309546 OTUB1Q96FW1 271 aaPredicted RBP17.64■□□□□ 0.41
LIME1-201ENST00000309546 CCM2LQ9NUG4 571 aaPredicted RBP17.64■□□□□ 0.41
LIME1-201ENST00000309546 SLC22A20A6NK97 555 aa17.63■□□□□ 0.41
LIME1-201ENST00000309546 TMEM114B3SHH9 223 aa17.63■□□□□ 0.41
LIME1-201ENST00000309546 H0YC42 278 aa17.63■□□□□ 0.41
LIME1-201ENST00000309546 PEX11AO75192 247 aa17.63■□□□□ 0.41
LIME1-201ENST00000309546 SKAP2O75563 359 aaPredicted RBP17.63■□□□□ 0.41
LIME1-201ENST00000309546 NKX2-2O95096 273 aa17.63■□□□□ 0.41
LIME1-201ENST00000309546 FGF4P08620 206 aa17.63■□□□□ 0.41
LIME1-201ENST00000309546 ACP2P11117 423 aa17.63■□□□□ 0.41
LIME1-201ENST00000309546 EPXP11678 715 aa17.63■□□□□ 0.41
LIME1-201ENST00000309546 MAPK1P28482 360 aa17.63■□□□□ 0.41
LIME1-201ENST00000309546 DIO3P55073 304 aa17.63■□□□□ 0.41
LIME1-201ENST00000309546 TPD52P55327 224 aaPredicted RBP17.63■□□□□ 0.41
LIME1-201ENST00000309546 BCL2A1Q16548 175 aa17.63■□□□□ 0.41
LIME1-201ENST00000309546 UGT3A2Q3SY77 523 aa17.63■□□□□ 0.41
LIME1-201ENST00000309546 FIGNL1Q6PIW4 674 aa17.63■□□□□ 0.41
LIME1-201ENST00000309546 APOOLQ6UXV4 268 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms