RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 ZNF350Q9GZX5 532 aa16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 KLHL1Q9NR64 748 aa16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 KLRF1Q9NZS2 232 aa16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 SLAMF8Q9P0V8 285 aa16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 B4GALT7Q9UBV7 327 aa16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 CNOT11Q9UKZ1 510 aaKnown RBP16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 BSNQ9UPA5 3926 aa16.43■□□□□ 0.22
SSSCA1-201ENST00000309328 KALRNO60229 2985 aa16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 H3BNH8 94 aa16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 UTS2O95399 124 aa16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 CYP4B1P13584 511 aa16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 TBXA2RP21731 343 aa16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 CASP3P42574 277 aa16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 RFX3P48380 749 aa16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 CRISP3P54108 245 aa16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 KCNJ2P63252 427 aa16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 RBBP4Q09028 425 aa16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 FAM180AQ6UWF9 173 aa16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 BNC2Q6ZN30 1099 aaPredicted RBP16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 LRRC74BQ6ZQY2 392 aa16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 PTRH1Q86Y79 214 aaKnown RBP16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 TREML1Q86YW5 311 aa16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 SLC30A8Q8IWU4 369 aa16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 SULF2Q8IWU5 870 aa16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 ZFP62Q8NB50 900 aaPredicted RBP16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 PNPT1Q8TCS8 783 aaKnown RBP16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 AURKBQ96GD4 344 aaPredicted RBP16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 TMEM41AQ96HV5 264 aa16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 ZNF597Q96LX8 424 aa16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 CPPED1Q9BRF8 314 aaPredicted RBP16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 THUMPD3Q9BV44 507 aaKnown RBP16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 TBL1XR1Q9BZK7 514 aa16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 TMEM38AQ9H6F2 299 aa16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 CACYBPQ9HB71 228 aaKnown RBP16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 A4GALTQ9NPC4 353 aa16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 AGPAT4Q9NRZ5 378 aa16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 TAGLN3Q9UI15 199 aa16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 WDR45Q9Y484 360 aa16.42■□□□□ 0.22
SSSCA1-201ENST00000309328 A0A1W2PQD3 144 aa16.41■□□□□ 0.22
SSSCA1-201ENST00000309328 ALG1L2C9J202 215 aa16.41■□□□□ 0.22
SSSCA1-201ENST00000309328 SCDO00767 359 aa16.41■□□□□ 0.22
SSSCA1-201ENST00000309328 ICOSLGO75144 302 aa16.41■□□□□ 0.22
SSSCA1-201ENST00000309328 NR2F1P10589 423 aa16.41■□□□□ 0.22
SSSCA1-201ENST00000309328 CD1EP15812 388 aa16.41■□□□□ 0.22
SSSCA1-201ENST00000309328 ATP12AP54707 1039 aa16.41■□□□□ 0.22
SSSCA1-201ENST00000309328 HYAL4Q2M3T9 481 aa16.41■□□□□ 0.22
SSSCA1-201ENST00000309328 FLYWCH1Q4VC44 716 aa16.41■□□□□ 0.22
SSSCA1-201ENST00000309328 COX20Q5RI15 118 aa16.41■□□□□ 0.22
SSSCA1-201ENST00000309328 GCNT6Q5T4J0 391 aa16.41■□□□□ 0.22
SSSCA1-201ENST00000309328 FIGNL1Q6PIW4 674 aa16.41■□□□□ 0.22
SSSCA1-201ENST00000309328 SERPINA11Q86U17 422 aa16.41■□□□□ 0.22
SSSCA1-201ENST00000309328 SLC22A16Q86VW1 577 aa16.41■□□□□ 0.22
SSSCA1-201ENST00000309328 POU5F2Q8N7G0 328 aa16.41■□□□□ 0.22
SSSCA1-201ENST00000309328 Q8NA96 180 aa16.41■□□□□ 0.22
SSSCA1-201ENST00000309328 OR2M7Q8NG81 312 aa16.41■□□□□ 0.22
SSSCA1-201ENST00000309328 RCN3Q96D15 328 aa16.41■□□□□ 0.22
SSSCA1-201ENST00000309328 FRMD6Q96NE9 622 aa16.41■□□□□ 0.22
SSSCA1-201ENST00000309328 SAP130Q9H0E3 1048 aa16.41■□□□□ 0.22
SSSCA1-201ENST00000309328 QPCTLQ9NXS2 382 aa16.41■□□□□ 0.22
SSSCA1-201ENST00000309328 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.41■□□□□ 0.22
SSSCA1-201ENST00000309328 TTLL8A6PVC2 850 aa16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 FXYD1O00168 92 aa16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 AIM2O14862 343 aa16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 FADS1O60427 444 aa16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 DNAJA2O60884 412 aa16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 IGKV1D-16P01601 117 aa16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 ETFAP13804 333 aa16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 ZNF24P17028 368 aa16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 MASP1P48740 699 aa16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 MEOX1P50221 254 aa16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 ZSWIM7Q19AV6 140 aa16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 ZNF630Q2M218 657 aaPredicted RBP16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 GPAT3Q53EU6 434 aa16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 SOWAHCQ53LP3 525 aaPredicted RBP16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 NANOGP8Q6NSW7 305 aa16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 ZNF619Q8N2I2 560 aa16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 FITM2Q8N6M3 262 aa16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 GRHL3Q8TE85 626 aa16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 RAB8BQ92930 207 aa16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 NTNG2Q96CW9 530 aa16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 OTUB1Q96FW1 271 aaPredicted RBP16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 BBC3Q96PG8 261 aaPredicted RBP16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 NODALQ96S42 347 aa16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 KAT8Q9H7Z6 458 aaKnown RBP16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 MTHFD2LQ9H903 347 aaPredicted RBP16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 NANOGQ9H9S0 305 aa16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 IL1RL2Q9HB29 575 aa16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 ZFP64Q9NPA5 681 aa16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 SUCOQ9UBS9 1254 aaKnown RBP16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 WIF1Q9Y5W5 379 aa16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 ATRXP46100 2492 aa16.4■□□□□ 0.22
SSSCA1-201ENST00000309328 CHD6Q8TD26 2715 aa16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 A0A0G2JPF8 293 aa16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 HNRNPCL2B2RXH8 293 aa16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 HNRNPCL3B7ZW38 293 aa16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 B8ZZF3 427 aa16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 C5orf58C9J3I9 102 aa16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 SUV39H1O43463 412 aa16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 SLC28A2O43868 658 aa16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 KIAA0513O60268 411 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms