RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 MAD2L1BPQ15013 274 aaPredicted RBP11.04□□□□□ -0.64
TRIM40-205ENST00000307859 LARS2Q15031 903 aaKnown RBP11.04□□□□□ -0.64
TRIM40-205ENST00000307859 SEC23BQ15437 767 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 EIPR1Q53HC9 387 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 BORAQ6PGQ7 559 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 ZNF773Q6PK81 442 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 ZNF574Q6ZN55 896 aaPredicted RBP11.04□□□□□ -0.64
TRIM40-205ENST00000307859 ZNF836Q6ZNA1 936 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 TMPRSS9Q7Z410 1059 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 GPR135Q8IZ08 494 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 GPR151Q8TDV0 419 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 PIK3R3Q92569 461 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 NAT6Q93015 286 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 VSTM2LQ96N03 204 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 NDC1Q9BTX1 674 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 FNDC11Q9BVV2 318 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 RBM38Q9H0Z9 239 aaKnown RBP11.04□□□□□ -0.64
TRIM40-205ENST00000307859 CACYBPQ9HB71 228 aaKnown RBP11.04□□□□□ -0.64
TRIM40-205ENST00000307859 NECTIN3Q9NQS3 549 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 FGF21Q9NSA1 209 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 KLHL28Q9NXS3 571 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 SERTAD3Q9UJW9 196 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 SLC13A4Q9UKG4 626 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 BLOC1S6Q9UL45 172 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 MGAT4BQ9UQ53 548 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 GPR55Q9Y2T6 319 aaPredicted RBP11.04□□□□□ -0.64
TRIM40-205ENST00000307859 PCDHGA6Q9Y5G7 932 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 HEMK1Q9Y5R4 338 aaPredicted RBP11.04□□□□□ -0.64
TRIM40-205ENST00000307859 MAU2Q9Y6X3 613 aa11.04□□□□□ -0.64
TRIM40-205ENST00000307859 A0A1W2PQM1 296 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 GXYLT2A0PJZ3 443 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 CPED1A4D0V7 1026 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 BRINP1O60477 761 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 CPNE6O95741 557 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 CER1O95813 267 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 GASTP01350 101 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 DBIP07108 87 aaKnown RBP11.03□□□□□ -0.64
TRIM40-205ENST00000307859 AGXTP21549 392 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 SSTR4P31391 388 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 GABRA3P34903 492 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 GGT2P36268 569 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 OR1D4P47884 311 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 CXCR4P61073 352 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 DSG2Q14126 1118 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 SLC23A3Q6PIS1 610 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 KLHL17Q6TDP4 642 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 QSOX2Q6ZRP7 698 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 CLIP4Q8N3C7 705 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 LINC00471Q8N535 108 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 OR4D9Q8NGE8 314 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 CNIH3Q8TBE1 160 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 SLC7A13Q8TCU3 470 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 DIO2Q92813 273 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 DGCR6LQ9BY27 220 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 ANKRD19PQ9H560 264 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 FANCEQ9HB96 536 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 DHCR7Q9UBM7 475 aaKnown RBP11.03□□□□□ -0.64
TRIM40-205ENST00000307859 ATXN7L1Q9ULK2 861 aaPredicted RBP11.03□□□□□ -0.64
TRIM40-205ENST00000307859 SLC6A14Q9UN76 642 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 ZNF232Q9UNY5 417 aa11.03□□□□□ -0.64
TRIM40-205ENST00000307859 COL27A1Q8IZC6 1860 aaPredicted RBP11.03□□□□□ -0.64
TRIM40-205ENST00000307859 IGKV3D-11A0A0A0MRZ8 115 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 CENPVL1A0A0U1RR11 272 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 A0A1B0GX78 115 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 OR2W5A6NFC9 320 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 PATE3B3GLJ2 98 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 HRKO00198 91 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 TPST2O60704 377 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 OR6B1O95007 311 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 KCNK2O95069 426 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 ANGPTL1O95841 491 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 CLPSP04118 112 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 NID1P14543 1247 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 ESRRGP62508 458 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 CCL7P80098 99 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 FOXC1Q12948 553 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 ZNF267Q14586 743 aaPredicted RBP11.02□□□□□ -0.64
TRIM40-205ENST00000307859 SF3A2Q15428 464 aaKnown RBP11.02□□□□□ -0.64
TRIM40-205ENST00000307859 ZNHIT3Q15649 155 aaPredicted RBP11.02□□□□□ -0.64
TRIM40-205ENST00000307859 GPR68Q15743 365 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 PROX2Q3B8N5 592 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 PGBD2Q6P3X8 592 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 PODNL1Q6PEZ8 512 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 ARHGAP22Q7Z5H3 698 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 B3GNT8Q7Z7M8 397 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 EID2Q8N6I1 236 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 ZNF615Q8N8J6 731 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 MORN4Q8NDC4 146 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 C7orf57Q8NEG2 295 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.02□□□□□ -0.64
TRIM40-205ENST00000307859 GTPBP3Q969Y2 492 aaKnown RBP11.02□□□□□ -0.64
TRIM40-205ENST00000307859 DPYSL5Q9BPU6 564 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 ADNPQ9H2P0 1102 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 FBXO34Q9NWN3 711 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 FTSJ1Q9UET6 329 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 NDOR1Q9UHB4 597 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 KCNE5Q9UJ90 142 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 EXPH5Q8NEV8 1989 aa11.02□□□□□ -0.64
TRIM40-205ENST00000307859 HEATR5AQ86XA9 2040 aa11.02□□□□□ -0.65
TRIM40-205ENST00000307859 TTC36A6NLP5 189 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms