RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 BABAM2Q9NXR7 383 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 SLCO3A1Q9UIG8 710 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 SMCO3A2RU48 225 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 AKAIN1P0CW23 69 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 ARSAP15289 507 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 ADPRMQ3LIE5 342 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 FAM180BQ6P0A1 224 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 MFSD6LQ8IWD5 586 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 OR2T11Q8NH01 316 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 TCTEX1D2Q8WW35 142 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 MS4A4EQ96PG1 132 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 C5AR2Q9P296 337 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 BACE2Q9Y5Z0 518 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 NPIPB15A6NHN6 443 aaPredicted RBP12.14□□□□□ -0.47
COL3A1-201ENST00000304636 CD3GP09693 182 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 HOXC12P31275 282 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 DLSTP36957 453 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 PDX1P52945 283 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 VSX2P58304 361 aaPredicted RBP12.14□□□□□ -0.47
COL3A1-201ENST00000304636 OXA1LQ15070 435 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 KIAA1211LQ6NV74 962 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 PODNL1Q6PEZ8 512 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 TMEM150AQ86TG1 271 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 LAX1Q8IWV1 398 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 CELF2-AS1Q8N7Q2 184 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 OR5D16Q8NGK9 328 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 ZNF417Q8TAU3 575 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 KCTD12Q96CX2 325 aaKnown RBP12.14□□□□□ -0.47
COL3A1-201ENST00000304636 ELP4Q96EB1 424 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 FAM83CQ9BQN1 747 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 CENPOQ9BU64 300 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 TTC34A8MYJ7 566 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 PTHP01270 115 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 FPGSQ05932 587 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 CCINQ13939 588 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 GGTA1PQ4G0N0 100 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 MTFR2Q6P444 385 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 LCTLQ6UWM7 567 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 FAM83HQ6ZRV2 1179 aaPredicted RBP12.14□□□□□ -0.47
COL3A1-201ENST00000304636 CADM3Q8N126 398 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 NEIL2Q969S2 332 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 MSLNLQ96KJ4 702 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 EGLN2Q96KS0 407 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 DHRS1Q96LJ7 313 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 SLC28A3Q9HAS3 691 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 NOX3Q9HBY0 568 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 HRASLS2Q9NWW9 162 aa12.14□□□□□ -0.47
COL3A1-201ENST00000304636 HMX2A2RU54 273 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 PRAMEF2O60811 474 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 RAD51DO75771 328 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 SSTR2P30874 369 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 CAMLGP49069 296 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 PLK5Q496M5 336 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 NADSYN1Q6IA69 706 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 Q6ZPB1 254 aaPredicted RBP12.13□□□□□ -0.47
COL3A1-201ENST00000304636 ENTHD1Q8IYW4 607 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 TMEM185AQ8NFB2 350 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 KIAA1143Q96AT1 154 aaPredicted RBP12.13□□□□□ -0.47
COL3A1-201ENST00000304636 PELOQ9BRX2 385 aaKnown RBP12.13□□□□□ -0.47
COL3A1-201ENST00000304636 ZNF649Q9BS31 505 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 C1QTNF2Q9BXJ5 285 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 NIPAL2Q9H841 368 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 GABRPO00591 440 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 RAB3DO95716 219 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 IFNA5P01569 189 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 MT-ND4P03905 459 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 SYPP08247 313 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 BMP1P13497 986 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 TUBG1P23258 451 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 GDI1P31150 447 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 RAB28P51157 221 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 PRPS1P60891 318 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 RPS21P63220 83 aaKnown RBP12.13□□□□□ -0.47
COL3A1-201ENST00000304636 ARHGAP40Q5TG30 622 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 GPR26Q8NDV2 337 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 ACOT11Q8WXI4 607 aaPredicted RBP12.13□□□□□ -0.47
COL3A1-201ENST00000304636 MEIS3P2A8K0S8 358 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 SLC33A1O00400 549 aaPredicted RBP12.13□□□□□ -0.47
COL3A1-201ENST00000304636 RRAS2P62070 204 aaPredicted RBP12.13□□□□□ -0.47
COL3A1-201ENST00000304636 HSD11B2P80365 405 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 MC2RQ01718 297 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 FAM205BPQ63HN1 556 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 OR7G2Q8NG99 324 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 OR8J2Q8NGG1 315 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 SYNPRQ8TBG9 265 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 TMEM239Q8WW34 195 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 DUS3LQ96G46 650 aaKnown RBP12.13□□□□□ -0.47
COL3A1-201ENST00000304636 TMEM88BA6NKF7 163 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 CPNE6O95741 557 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 C6P13671 934 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 IL32P24001 234 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 CD70P32970 193 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 DDOSTP39656 456 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 RAP2BP61225 183 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 ZER1Q7Z7L7 766 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 METTL7AQ9H8H3 244 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 INSL6Q9Y581 213 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 USP3Q9Y6I4 520 aa12.13□□□□□ -0.47
COL3A1-201ENST00000304636 OR2A25A4D2G3 310 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 CACNG3O60359 315 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms