RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 CYP4B1P13584 511 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 NID1P14543 1247 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 FBLP22087 321 aaKnown RBP11.15□□□□□ -0.62
TPM3-202ENST00000302206 TTKP33981 857 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 GABRA3P34903 492 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 TRHRP34981 398 aaPredicted RBP11.15□□□□□ -0.62
TPM3-202ENST00000302206 EMDP50402 254 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 DUSP3P51452 185 aaPredicted RBP11.15□□□□□ -0.62
TPM3-202ENST00000302206 UGT2B15P54855 530 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 CDH15P55291 814 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 BTG2P78543 158 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 ALDH6A1Q02252 535 aaKnown RBP11.15□□□□□ -0.62
TPM3-202ENST00000302206 COX10Q12887 443 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 MAD2L1BPQ15013 274 aaPredicted RBP11.15□□□□□ -0.62
TPM3-202ENST00000302206 SYT16Q17RD7 645 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 PROX2Q3B8N5 592 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 FGD3Q5JSP0 725 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 LAIR2Q6ISS4 152 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 GUSBP11Q6P575 273 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 ZNF836Q6ZNA1 936 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 TTLL10Q6ZVT0 673 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 OR9Q2Q8NGE9 314 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 SLC35B4Q969S0 331 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 ZG16BQ96DA0 208 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 NIPSNAP1Q9BPW8 284 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 TUBA1CQ9BQE3 449 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 NUDT22Q9BRQ3 303 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 RBCK1Q9BYM8 510 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 QRSL1Q9H0R6 528 aaKnown RBP11.15□□□□□ -0.62
TPM3-202ENST00000302206 RBM38Q9H0Z9 239 aaKnown RBP11.15□□□□□ -0.62
TPM3-202ENST00000302206 LRRN3Q9H3W5 708 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 ARMC7Q9H6L4 198 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 ZNF304Q9HCX3 659 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 FGF21Q9NSA1 209 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 RHCGQ9UBD6 479 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 PRODH2Q9UF12 536 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 MKLN1Q9UL63 735 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 TPRKBQ9Y3C4 175 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 BOLA1Q9Y3E2 137 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 PCDHGA6Q9Y5G7 932 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 ADAMTS20P59510 1910 aa11.15□□□□□ -0.62
TPM3-202ENST00000302206 GON4LQ3T8J9 2241 aa11.15□□□□□ -0.63
TPM3-202ENST00000302206 CACNA1EQ15878 2313 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 PCDH15Q96QU1 1955 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 CPED1A4D0V7 1026 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 SLC1A7O00341 560 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 ARHGAP33O14559 1287 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 AP3D1O14617 1153 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 MPZL2O60487 215 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 NME6O75414 186 aaPredicted RBP11.14□□□□□ -0.63
TPM3-202ENST00000302206 CYP7B1O75881 506 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 KCNK2O95069 426 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 ANGPTL1O95841 491 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 CCNYL3P0C7X3 344 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 CKMT1AP12532 417 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 MYF5P13349 255 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 OSMP13725 252 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 IL7RP16871 459 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 EPHA2P29317 976 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 IFNGR2P38484 337 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 CRISP1P54107 249 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 PSMD4P55036 377 aaKnown RBP11.14□□□□□ -0.63
TPM3-202ENST00000302206 RGS8P57771 180 aaPredicted RBP11.14□□□□□ -0.63
TPM3-202ENST00000302206 TAS2R41P59536 307 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 CCL7P80098 99 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 PSG6Q00889 435 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 ST3GAL3Q11203 375 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 ILKQ13418 452 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 PIN1Q13526 163 aaPredicted RBP11.14□□□□□ -0.63
TPM3-202ENST00000302206 ZNF267Q14586 743 aaPredicted RBP11.14□□□□□ -0.63
TPM3-202ENST00000302206 TRAM2Q15035 370 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 SEC23BQ15437 767 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 ZBED5Q49AG3 693 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 SNAP47Q5SQN1 464 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 PERM1Q5SV97 790 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 PGBD2Q6P3X8 592 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 PODNL1Q6PEZ8 512 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 KLHL17Q6TDP4 642 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 ZNF574Q6ZN55 896 aaPredicted RBP11.14□□□□□ -0.63
TPM3-202ENST00000302206 ZNF615Q8N8J6 731 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 MORN4Q8NDC4 146 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 SLC7A13Q8TCU3 470 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 PIK3R3Q92569 461 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 DIO2Q92813 273 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 SLC38A4Q969I6 547 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 CNDP2Q96KP4 475 aaKnown RBP11.14□□□□□ -0.63
TPM3-202ENST00000302206 ADNPQ9H2P0 1102 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 DUSP21Q9H596 190 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 VCX3AQ9NNX9 186 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 MKKSQ9NPJ1 570 aaPredicted RBP11.14□□□□□ -0.63
TPM3-202ENST00000302206 NECTIN3Q9NQS3 549 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 MAN2C1Q9NTJ4 1040 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 PLCXD1Q9NUJ7 323 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 SCN3BQ9NY72 215 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 REV1Q9UBZ9 1251 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 FTSJ1Q9UET6 329 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 PCDHGA10Q9Y5H3 936 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 NUP210LQ5VU65 1888 aa11.14□□□□□ -0.63
TPM3-202ENST00000302206 ZFYVE26Q68DK2 2539 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 CCDC88CQ9P219 2028 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms