RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 ALDOBP05062 364 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 LPLP06858 475 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 PROS1P07225 676 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 GJA1P17302 382 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 TRIM23P36406 574 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 SIM1P81133 766 aaPredicted RBP10.2□□□□□ -0.78
ZNF558-201ENST00000301475 GRM7Q14831 915 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 GPR68Q15743 365 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 ESPNLQ6ZVH7 1005 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 ZNF480Q8WV37 535 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 ELMOD3Q96FG2 381 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 TIMP4Q99727 224 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 KLF16Q9BXK1 252 aaPredicted RBP10.2□□□□□ -0.78
ZNF558-201ENST00000301475 SPRTNQ9H040 489 aaPredicted RBP10.2□□□□□ -0.78
ZNF558-201ENST00000301475 DDX31Q9H8H2 851 aaKnown RBP10.2□□□□□ -0.78
ZNF558-201ENST00000301475 CFAP97Q9P2B7 532 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 A8MXK9 166 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 FOXE1O00358 373 aaPredicted RBP10.2□□□□□ -0.78
ZNF558-201ENST00000301475 SOCS6O14544 535 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 MMP20O60882 483 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 IGSF6O95976 241 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 CYBAP13498 195 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 GNSP15586 552 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 PDHA2P29803 388 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 TM4SF4P48230 202 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 CTSCP53634 463 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 SP3Q02447 781 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 SFRP5Q5T4F7 317 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 RETSATQ6NUM9 610 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 PRSS55Q6UWB4 352 aaPredicted RBP10.2□□□□□ -0.78
ZNF558-201ENST00000301475 C3P1Q6ZMU1 363 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 TTLQ8NG68 377 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 OR4D9Q8NGE8 314 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 RPLP0P6Q8NHW5 317 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 THAP4Q8WY91 577 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 ZFP3Q96NJ6 502 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 TMEM168Q9H0V1 697 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 C20orf85Q9H1P6 137 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 B4GALT6Q9UBX8 382 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 IL20RAQ9UHF4 553 aa10.2□□□□□ -0.78
ZNF558-201ENST00000301475 CASP8AP2Q9UKL3 1982 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 GOLGA4Q13439 2230 aaKnown RBP10.19□□□□□ -0.78
ZNF558-201ENST00000301475 CATP04040 527 aaKnown RBP10.19□□□□□ -0.78
ZNF558-201ENST00000301475 UGT2B7P16662 529 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 NPPBP16860 134 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 EPHA4P54764 986 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 MANFP55145 182 aaKnown RBP10.19□□□□□ -0.78
ZNF558-201ENST00000301475 B2MP61769 119 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 IRF5Q13568 498 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 KCNA10Q16322 511 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 DEFB115Q30KQ5 88 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 HSD17B12Q53GQ0 312 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 ATRAIDQ6UW56 229 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 OR2AP1Q8NGE2 309 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 CD99L2Q8TCZ2 262 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 ZFPM2Q8WW38 1151 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 KCTD12Q96CX2 325 aaKnown RBP10.19□□□□□ -0.78
ZNF558-201ENST00000301475 WDR89Q96FK6 387 aaPredicted RBP10.19□□□□□ -0.78
ZNF558-201ENST00000301475 FAM46AQ96IP4 442 aaKnown RBP10.19□□□□□ -0.78
ZNF558-201ENST00000301475 PRRC1Q96M27 445 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 ZNF607Q96SK3 696 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 AUNIPQ9H7T9 357 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 MARCH5Q9NX47 278 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 MARK1Q9P0L2 795 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 COPZ2Q9P299 210 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 EXOGQ9Y2C4 368 aaKnown RBP10.19□□□□□ -0.78
ZNF558-201ENST00000301475 MRPS7Q9Y2R9 242 aaKnown RBP10.19□□□□□ -0.78
ZNF558-201ENST00000301475 Q9Y3F1 56 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 PDE4DIPQ5VU43 2346 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 FAM170BA6NMN3 283 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 CACNB4O00305 520 aaPredicted RBP10.19□□□□□ -0.78
ZNF558-201ENST00000301475 RTCAO00442 366 aaKnown RBP10.19□□□□□ -0.78
ZNF558-201ENST00000301475 SURF4O15260 269 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 SEPT4O43236 478 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 PEPDP12955 493 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 HMGA1P17096 107 aaKnown RBP10.19□□□□□ -0.78
ZNF558-201ENST00000301475 VIPR1P32241 457 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 RAG2P55895 527 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 KIAA1024LP59773 190 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 NOGQ13253 232 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 SYTL3Q4VX76 610 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 HACD4Q5VWC8 232 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 CPXM2Q8N436 756 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 OR56B4Q8NH76 319 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 MOSPD2Q8NHP6 518 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 CNOT9Q92600 299 aaKnown RBP10.19□□□□□ -0.78
ZNF558-201ENST00000301475 FCRL4Q96PJ5 515 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 SLC22A12Q96S37 553 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 TBX5Q99593 518 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 CA10Q9NS85 328 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 ING1Q9UK53 422 aaPredicted RBP10.19□□□□□ -0.78
ZNF558-201ENST00000301475 PRKAB1Q9Y478 270 aa10.19□□□□□ -0.78
ZNF558-201ENST00000301475 MTCL1Q9Y4B5 1905 aaKnown RBP10.18□□□□□ -0.78
ZNF558-201ENST00000301475 ZC3H12DA2A288 527 aaKnown RBP10.18□□□□□ -0.78
ZNF558-201ENST00000301475 FAM183AA6NL82 134 aa10.18□□□□□ -0.78
ZNF558-201ENST00000301475 RPL17P18621 184 aaKnown RBP10.18□□□□□ -0.78
ZNF558-201ENST00000301475 GSTM3P21266 225 aa10.18□□□□□ -0.78
ZNF558-201ENST00000301475 GALP22466 123 aa10.18□□□□□ -0.78
ZNF558-201ENST00000301475 ATP5A1P25705 553 aaKnown RBP10.18□□□□□ -0.78
ZNF558-201ENST00000301475 CTSOP43234 321 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms