RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 GRHL3Q8TE85 626 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 RIT1Q92963 219 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 RERGLQ9H628 205 aa16.7■□□□□ 0.26
CAPN1-201ENST00000279247 TRIM45Q9H8W5 580 aaPredicted RBP16.7■□□□□ 0.26
CAPN1-201ENST00000279247 DHCR7Q9UBM7 475 aaKnown RBP16.7■□□□□ 0.26
CAPN1-201ENST00000279247 PNMA8CA0A1B0GUJ8 204 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 THY1P04216 161 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 IFNA8P32881 189 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 ST3GAL3Q11203 375 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 DCTN2Q13561 401 aaKnown RBP16.69■□□□□ 0.26
CAPN1-201ENST00000279247 TRAM2Q15035 370 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 ARHGAP11BQ3KRB8 267 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 SYT6Q5T7P8 510 aaPredicted RBP16.69■□□□□ 0.26
CAPN1-201ENST00000279247 FHL5Q5TD97 284 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 HEPHL1Q6MZM0 1159 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 SLC30A6Q6NXT4 461 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 KIF18BQ86Y91 864 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 ANKRD13BQ86YJ7 626 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.69■□□□□ 0.26
CAPN1-201ENST00000279247 SLC41A3Q96GZ6 507 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 SHDQ96IW2 340 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 TWSG1Q9GZX9 223 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 SIT1Q9Y3P8 196 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 PCDHGB1Q9Y5G3 927 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 RNF215Q9Y6U7 377 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 CACNA1EQ15878 2313 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 DSPPQ9NZW4 1301 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 CBX7O95931 251 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 ADORA3P0DMS8 318 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 RNH1P13489 461 aaKnown RBP16.69■□□□□ 0.26
CAPN1-201ENST00000279247 ARL4DP49703 201 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 GDF7Q7Z4P5 450 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 SLCO6A1Q86UG4 719 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 RBM12BQ8IXT5 1001 aaKnown RBP16.69■□□□□ 0.26
CAPN1-201ENST00000279247 SLC34A3Q8N130 599 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 CDRT4Q8N9R6 151 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 FUZQ9BT04 418 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 CLEC2DQ9UHP7 191 aa16.69■□□□□ 0.26
CAPN1-201ENST00000279247 CEP192Q8TEP8 1941 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 ARRDC5A6NEK1 342 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 TP53P04637 393 aaPredicted RBP16.68■□□□□ 0.26
CAPN1-201ENST00000279247 GIPRP48546 466 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 RPS3AP61247 264 aaKnown RBP16.68■□□□□ 0.26
CAPN1-201ENST00000279247 MINDY4Q4G0A6 757 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 SHFQ7M4L6 423 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 DIO2Q92813 273 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 SPACA7Q96KW9 195 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 ARHGDIGQ99819 225 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 SH3GL3Q99963 347 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 ITPAQ9BY32 194 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 PRTFDC1Q9NRG1 225 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 GNSP15586 552 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 GADD45AP24522 165 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 PRKAR1BP31321 381 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 NUDT1P36639 197 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 CXCL12P48061 93 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 NXPH1P58417 271 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 MGAT2Q10469 447 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 FLYWCH1Q4VC44 716 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 ARMCX4Q5H9R4 360 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 PAQR6Q6TCH4 344 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 GATAD2AQ86YP4 633 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 AMER2Q8N7J2 671 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 TCTN2Q96GX1 697 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 LRR1Q96L50 414 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 GPN2Q9H9Y4 310 aaPredicted RBP16.68■□□□□ 0.26
CAPN1-201ENST00000279247 ZBTB20Q9HC78 741 aaPredicted RBP16.68■□□□□ 0.26
CAPN1-201ENST00000279247 PDE7BQ9NP56 450 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 ERVK-19Q9WJR5 959 aa16.68■□□□□ 0.26
CAPN1-201ENST00000279247 AGAP5A6NIR3 686 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 LMO7DNF2Z398 122 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 M0R082 166 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 PLOD3O60568 738 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 FOXL2P58012 376 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 POU6F2P78424 691 aaPredicted RBP16.67■□□□□ 0.26
CAPN1-201ENST00000279247 DUSP8Q13202 625 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 PDZK1Q5T2W1 519 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 ALDH16A1Q8IZ83 802 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 SPEM1Q8N4L4 309 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 OR8D4Q8NGM9 314 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 TEX47Q8TBZ9 253 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 HSPBAP1Q96EW2 488 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 CNDP2Q96KP4 475 aaKnown RBP16.67■□□□□ 0.26
CAPN1-201ENST00000279247 BCAT2O15382 392 aaPredicted RBP16.67■□□□□ 0.26
CAPN1-201ENST00000279247 CNOT3O75175 753 aaKnown RBP16.67■□□□□ 0.26
CAPN1-201ENST00000279247 PIAS2O75928 621 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 CSNK2BP67870 215 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 DOC2BQ14184 412 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 PRTGQ2VWP7 1150 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 C14orf28Q4W4Y0 310 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 SLX4IPQ5VYV7 408 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 ZNF619Q8N2I2 560 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 YIPF6Q96EC8 236 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 CHCHD6Q9BRQ6 235 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.67■□□□□ 0.26
CAPN1-201ENST00000279247 SYNDIG1Q9H7V2 258 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 KLK4Q9Y5K2 254 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 EFCAB9A8MZ26 197 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 TMEM150CB9EJG8 249 aa16.67■□□□□ 0.26
CAPN1-201ENST00000279247 SYT5O00445 386 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms