RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 MCCC2Q9HCC0 563 aa13.1□□□□□ -0.31
HMGN3-201ENST00000275036 KCNK9Q9NPC2 374 aa13.1□□□□□ -0.31
HMGN3-201ENST00000275036 EMC8O43402 210 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 ZIC3O60481 467 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 ZWINTO95229 277 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 ACTL6AO96019 429 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 G6PDP11413 515 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 POU3F2P20265 443 aaPredicted RBP13.09□□□□□ -0.31
HMGN3-201ENST00000275036 TCEA1P23193 301 aaKnown RBP13.09□□□□□ -0.31
HMGN3-201ENST00000275036 CEACAM8P31997 349 aaPredicted RBP13.09□□□□□ -0.31
HMGN3-201ENST00000275036 RFX3P48380 749 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 SLC1A6P48664 564 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 STARP49675 285 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 MRPS22P82650 360 aaKnown RBP13.09□□□□□ -0.31
HMGN3-201ENST00000275036 AKAP6Q13023 2319 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 MLC1Q15049 377 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 MFSD12Q6NUT3 480 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 PLXDC2Q6UX71 529 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 SZRD1Q7Z422 152 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 ZAR1Q86SH2 424 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 GALNT10Q86SR1 603 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 HEATR5AQ86XA9 2040 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 TRIM42Q8IWZ5 723 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 PM20D2Q8IYS1 436 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 FADS6Q8N9I5 356 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 SLC16A11Q8NCK7 471 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 OR2M3Q8NG83 312 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 GPR151Q8TDV0 419 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 FAM120BQ96EK7 910 aaKnown RBP13.09□□□□□ -0.31
HMGN3-201ENST00000275036 OTUB1Q96FW1 271 aaPredicted RBP13.09□□□□□ -0.31
HMGN3-201ENST00000275036 RMND5BQ96G75 393 aaPredicted RBP13.09□□□□□ -0.31
HMGN3-201ENST00000275036 MS4A4EQ96PG1 132 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 DSN1Q9H410 356 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 FBXO34Q9NWN3 711 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 FAM120CQ9NX05 1096 aaKnown RBP13.09□□□□□ -0.31
HMGN3-201ENST00000275036 TAS2R10Q9NYW0 307 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 HAO1Q9UJM8 370 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 ABCG2Q9UNQ0 655 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 RAP2CQ9Y3L5 183 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 L3MBTL1Q9Y468 752 aa13.09□□□□□ -0.31
HMGN3-201ENST00000275036 A0A1W2PRB8 838 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 TTC36A6NLP5 189 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 UTS2O95399 124 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 DPP4P27487 766 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 LHX2P50458 406 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 ZNF136P52737 540 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 WDR4P57081 412 aaKnown RBP13.08□□□□□ -0.32
HMGN3-201ENST00000275036 B3GALT5-AS1P59052 145 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 EMX2Q04743 252 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 STX5Q13190 355 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 DUSP5Q16690 384 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 GRAMD1BQ3KR37 738 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 BEND6Q5SZJ8 279 aaPredicted RBP13.08□□□□□ -0.32
HMGN3-201ENST00000275036 CPTPQ5TA50 214 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 NSUN5P2Q63ZY6 315 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 MARCH3Q86UD3 253 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 IFNEQ86WN2 208 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 LACC1Q8IV20 430 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 PIP4P2Q8N4L2 257 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 ANKRD42Q8N9B4 389 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 CDRT4Q8N9R6 151 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 CEP70Q8NHQ1 597 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 FAM110BQ8TC76 370 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 SLC9A6Q92581 669 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 COQ8BQ96D53 544 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 TRIB1Q96RU8 372 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 SH3GL2Q99962 352 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 TUBA1CQ9BQE3 449 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 YIPF4Q9BSR8 244 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 G6PC3Q9BUM1 346 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 CXorf36Q9H7Y0 433 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 AKTIPQ9H8T0 292 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 MED11Q9P086 117 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 PPP4R1LQ9P1A2 415 aa13.08□□□□□ -0.32
HMGN3-201ENST00000275036 RPH3AQ9Y2J0 694 aaPredicted RBP13.08□□□□□ -0.32
HMGN3-201ENST00000275036 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.08□□□□□ -0.32
HMGN3-201ENST00000275036 MRPS18CQ9Y3D5 142 aaKnown RBP13.08□□□□□ -0.32
HMGN3-201ENST00000275036 MBD3L4A6NDZ8 208 aaPredicted RBP13.07□□□□□ -0.32
HMGN3-201ENST00000275036 MBD3L3A6NE82 208 aaPredicted RBP13.07□□□□□ -0.32
HMGN3-201ENST00000275036 MBD3L5A6NJ08 208 aaPredicted RBP13.07□□□□□ -0.32
HMGN3-201ENST00000275036 CD8B2A6NJW9 211 aa13.07□□□□□ -0.32
HMGN3-201ENST00000275036 KCNK2O95069 426 aa13.07□□□□□ -0.32
HMGN3-201ENST00000275036 KCNH1O95259 989 aa13.07□□□□□ -0.32
HMGN3-201ENST00000275036 C6orf47O95873 294 aa13.07□□□□□ -0.32
HMGN3-201ENST00000275036 CPN1P15169 458 aa13.07□□□□□ -0.32
HMGN3-201ENST00000275036 PRPS1L1P21108 318 aa13.07□□□□□ -0.32
HMGN3-201ENST00000275036 BMP5P22003 454 aa13.07□□□□□ -0.32
HMGN3-201ENST00000275036 TIMP3P35625 211 aa13.07□□□□□ -0.32
HMGN3-201ENST00000275036 RPL3P39023 403 aaKnown RBP13.07□□□□□ -0.32
HMGN3-201ENST00000275036 RPL14P50914 215 aaKnown RBP13.07□□□□□ -0.32
HMGN3-201ENST00000275036 DIO3P55073 304 aa13.07□□□□□ -0.32
HMGN3-201ENST00000275036 C21orf58P58505 322 aa13.07□□□□□ -0.32
HMGN3-201ENST00000275036 SRYQ05066 204 aa13.07□□□□□ -0.32
HMGN3-201ENST00000275036 BST1Q10588 318 aa13.07□□□□□ -0.32
HMGN3-201ENST00000275036 SLC25A35Q3KQZ1 300 aa13.07□□□□□ -0.32
HMGN3-201ENST00000275036 FIGNL1Q6PIW4 674 aa13.07□□□□□ -0.32
HMGN3-201ENST00000275036 ADGRE4PQ86SQ3 457 aa13.07□□□□□ -0.32
HMGN3-201ENST00000275036 CROCCP2Q86T23 111 aa13.07□□□□□ -0.32
HMGN3-201ENST00000275036 C9orf106Q8NAJ2 232 aa13.07□□□□□ -0.32
HMGN3-201ENST00000275036 OR4K17Q8NGC6 315 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms