RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 PLBD1Q6P4A8 553 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 NR2C2APQ86WQ0 139 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 SLITRK4Q8IW52 837 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 ZNF614Q8N883 585 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 ZFP41Q8N8Y5 198 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 OR2L5Q8NG80 312 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 C14orf79Q96F83 325 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 OCSTAMPQ9BR26 566 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 SUCNR1Q9BXA5 334 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 DUSP16Q9BY84 665 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 CLMPQ9H6B4 373 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 TXNRD2Q9NNW7 524 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 FTSJ1Q9UET6 329 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 SIX4Q9UIU6 781 aa8.67□□□□□ -1.02
PDGFC-201ENST00000274071 IGKV6D-21A0A0A0MT36 114 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 TRDV1A0A1B0GX56 115 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 FAM72CH0Y354 149 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 SUV39H1O43463 412 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 KERAO60938 352 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 ECI2O75521 394 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 CNMDO75829 334 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 RAB3DO95716 219 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 IFNA10P01566 189 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 RHOP08100 348 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 CPN1P15169 458 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 IDSP22304 550 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 PAX6P26367 422 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 BDKRB2P30411 391 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 GABRA5P31644 462 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 CHI3L1P36222 383 aaPredicted RBP8.66□□□□□ -1.02
PDGFC-201ENST00000274071 FEN1P39748 380 aaKnown RBP8.66□□□□□ -1.02
PDGFC-201ENST00000274071 CRATP43155 626 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 CSNK1EP49674 416 aaKnown RBP8.66□□□□□ -1.02
PDGFC-201ENST00000274071 HCCSP53701 268 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 CDH12P55289 794 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 TNFRSF9Q07011 255 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 RBM39Q14498 530 aaKnown RBP8.66□□□□□ -1.02
PDGFC-201ENST00000274071 GINS1Q14691 196 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 LY6KQ17RY6 165 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 GOLGA7BQ2TAP0 167 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 FAM72AQ5TYM5 149 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 SFRP4Q6FHJ7 346 aaPredicted RBP8.66□□□□□ -1.02
PDGFC-201ENST00000274071 FAM72DQ6L9T8 149 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 SERPINA11Q86U17 422 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 FAM72BQ86X60 149 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 C15orf54Q8N8G6 183 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 RASGEF1AQ8N9B8 481 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 OR5T3Q8NGG3 340 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 OR56A4Q8NGH8 313 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 OR4C15Q8NGM1 316 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 STAG3L4Q8TBR4 150 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 SP7Q8TDD2 431 aaPredicted RBP8.66□□□□□ -1.02
PDGFC-201ENST00000274071 MYLIPQ8WY64 445 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 PIGKQ92643 395 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 ASB16Q96NS5 453 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 TGM7Q96PF1 710 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 CDCA3Q99618 268 aaPredicted RBP8.66□□□□□ -1.02
PDGFC-201ENST00000274071 DPH2Q9BQC3 489 aaPredicted RBP8.66□□□□□ -1.02
PDGFC-201ENST00000274071 OR10A4Q9H209 315 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 CHRDQ9H2X0 955 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 UNKLQ9H9P5 680 aaKnown RBP8.66□□□□□ -1.02
PDGFC-201ENST00000274071 RBPJLQ9UBG7 517 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 FBXL3Q9UKT7 428 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 RPL36Q9Y3U8 105 aaKnown RBP8.66□□□□□ -1.02
PDGFC-201ENST00000274071 C2orf92A0A1B0GVN3 265 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 TMEM72A0PK05 275 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 NPIPB9F8W1W9 429 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 CCL22O00626 93 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 SLC25A27O95847 323 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 ANXA2P07355 339 aaKnown RBP8.66□□□□□ -1.02
PDGFC-201ENST00000274071 HOXB9P17482 250 aaPredicted RBP8.66□□□□□ -1.02
PDGFC-201ENST00000274071 HLA-DPA1P20036 260 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 FDXRP22570 491 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 SHC1P29353 583 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 RBMS1P29558 406 aaKnown RBP8.66□□□□□ -1.02
PDGFC-201ENST00000274071 GNALP38405 381 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 RAD52P43351 418 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 CRISP1P54107 249 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 ZNF239Q16600 458 aaKnown RBP8.66□□□□□ -1.02
PDGFC-201ENST00000274071 SAMD12Q8N8I0 201 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 FAM71CQ8NEG0 241 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 WFIKKN2Q8TEU8 576 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 SLC35F5Q8WV83 523 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 THAP4Q8WY91 577 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 OSTF1Q92882 214 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 PNPLA2Q96AD5 504 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 ZNF354BQ96LW1 612 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 CLCC1Q96S66 551 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 PCYT2Q99447 389 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 MAPKAP1Q9BPZ7 522 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 TSSK6Q9BXA6 273 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 PORCNQ9H237 461 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 PRO1933Q9H354 126 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 COX16Q9P0S2 106 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 ZNF69Q9UC07 566 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 OPN4Q9UHM6 478 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 PAPPA2Q9BXP8 1791 aa8.66□□□□□ -1.02
PDGFC-201ENST00000274071 NUP214P35658 2090 aaPredicted RBP8.66□□□□□ -1.02
PDGFC-201ENST00000274071 NUP205Q92621 2012 aa8.65□□□□□ -1.02
PDGFC-201ENST00000274071 IFITM10A6NMD0 228 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms