RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 IKZF5Q9H5V7 419 aa11.68□□□□□ -0.54
SS18-202ENST00000269138 KLRF1Q9NZS2 232 aa11.68□□□□□ -0.54
SS18-202ENST00000269138 MRTO4Q9UKD2 239 aaKnown RBP11.68□□□□□ -0.54
SS18-202ENST00000269138 ARL2BPQ9Y2Y0 163 aa11.68□□□□□ -0.54
SS18-202ENST00000269138 EML6Q6ZMW3 1958 aa11.67□□□□□ -0.54
SS18-202ENST00000269138 DUXAA6NLW8 204 aa11.67□□□□□ -0.54
SS18-202ENST00000269138 PYCARD-AS1I3L0S3 204 aa11.67□□□□□ -0.54
SS18-202ENST00000269138 SCO2O43819 266 aa11.67□□□□□ -0.54
SS18-202ENST00000269138 HS6ST1O60243 411 aa11.67□□□□□ -0.54
SS18-202ENST00000269138 FCMRO60667 390 aa11.67□□□□□ -0.54
SS18-202ENST00000269138 GLSO94925 669 aaPredicted RBP11.67□□□□□ -0.54
SS18-202ENST00000269138 ZIC2O95409 532 aaPredicted RBP11.67□□□□□ -0.54
SS18-202ENST00000269138 FAM107AO95990 144 aa11.67□□□□□ -0.54
SS18-202ENST00000269138 RFPL3SP0C7P2 107 aa11.67□□□□□ -0.54
SS18-202ENST00000269138 EVI2BP34910 448 aa11.67□□□□□ -0.54
SS18-202ENST00000269138 GAS1P54826 345 aa11.67□□□□□ -0.54
SS18-202ENST00000269138 PPIAP62937 165 aaKnown RBP11.67□□□□□ -0.54
SS18-202ENST00000269138 PLGLB1Q02325 96 aa11.67□□□□□ -0.54
SS18-202ENST00000269138 HEPHL1Q6MZM0 1159 aa11.67□□□□□ -0.54
SS18-202ENST00000269138 TMEM81Q6P7N7 255 aa11.67□□□□□ -0.54
SS18-202ENST00000269138 DHDDSQ86SQ9 333 aa11.67□□□□□ -0.54
SS18-202ENST00000269138 SIAH3Q8IW03 269 aa11.67□□□□□ -0.54
SS18-202ENST00000269138 C10orf111Q8N326 155 aa11.67□□□□□ -0.54
SS18-202ENST00000269138 CHDHQ8NE62 594 aaPredicted RBP11.67□□□□□ -0.54
SS18-202ENST00000269138 OR52N2Q8NGI0 321 aa11.67□□□□□ -0.54
SS18-202ENST00000269138 DNAJB8Q8NHS0 232 aa11.67□□□□□ -0.54
SS18-202ENST00000269138 OSBPL11Q9BXB4 747 aa11.67□□□□□ -0.54
SS18-202ENST00000269138 TTTY12Q9BZ98 90 aa11.67□□□□□ -0.54
SS18-202ENST00000269138 TRIM8Q9BZR9 551 aa11.67□□□□□ -0.54
SS18-202ENST00000269138 OLAHQ9NV23 265 aa11.67□□□□□ -0.54
SS18-202ENST00000269138 MRGBPQ9NV56 204 aa11.67□□□□□ -0.54
SS18-202ENST00000269138 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.67□□□□□ -0.54
SS18-202ENST00000269138 PCDHGB3Q9Y5G1 929 aa11.67□□□□□ -0.54
SS18-202ENST00000269138 ZNF462Q96JM2 2506 aa11.67□□□□□ -0.54
SS18-202ENST00000269138 EXPH5Q8NEV8 1989 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 NPIPA5E9PKD4 350 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 GNB5O14775 395 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 SLC22A2O15244 555 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 ASNA1O43681 348 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 SOX30O94993 753 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 CRYABP02511 175 aaKnown RBP11.66□□□□□ -0.54
SS18-202ENST00000269138 NUDT7P0C024 238 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 ZNF24P17028 368 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 CRATP43155 626 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 RNF144AP50876 292 aaPredicted RBP11.66□□□□□ -0.54
SS18-202ENST00000269138 PSMD4P55036 377 aaKnown RBP11.66□□□□□ -0.54
SS18-202ENST00000269138 ALDH6A1Q02252 535 aaKnown RBP11.66□□□□□ -0.54
SS18-202ENST00000269138 NFYCQ13952 458 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 CYLC2Q14093 348 aaPredicted RBP11.66□□□□□ -0.54
SS18-202ENST00000269138 SELPLGQ14242 412 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 CAPRIN1Q14444 709 aaKnown RBP11.66□□□□□ -0.54
SS18-202ENST00000269138 MAPK11Q15759 364 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 SYPL1Q16563 259 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 ARHGAP11BQ3KRB8 267 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 RUNDC3AQ59EK9 446 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 TBCELQ5QJ74 424 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 REP15Q6BDI9 236 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 SLC30A6Q6NXT4 461 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 C16orf62Q7Z3J2 963 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 ZNF605Q86T29 641 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 MARCH3Q86UD3 253 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 TMEM251Q8N6I4 163 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 ANKFN1Q8N957 763 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 POGLUT1Q8NBL1 392 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 NR4A3Q92570 626 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 MIB2Q96AX9 1013 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 ROPN1LQ96C74 230 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 GNRHR2Q96P88 292 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 CGREF1Q99674 301 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 CPPED1Q9BRF8 314 aaPredicted RBP11.66□□□□□ -0.54
SS18-202ENST00000269138 G6PC3Q9BUM1 346 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 ZFP64Q9NPA5 681 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 EXD2Q9NVH0 621 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 NPIPA1Q9UND3 350 aa11.66□□□□□ -0.54
SS18-202ENST00000269138 PRRC2CQ9Y520 2896 aaKnown RBP11.66□□□□□ -0.54
SS18-202ENST00000269138 SPENQ96T58 3664 aaKnown RBP11.66□□□□□ -0.54
SS18-202ENST00000269138 B4DXG7 233 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 MRASO14807 208 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 SNX4O95219 450 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 OXSR1O95747 527 aaPredicted RBP11.65□□□□□ -0.54
SS18-202ENST00000269138 CELA3AP09093 270 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 COX4I1P13073 169 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 ATP6V1C1P21283 382 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 MASP1P48740 699 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 TDGF1P3P51864 188 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 STX5Q13190 355 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 SNTA1Q13424 505 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 RGNQ15493 299 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 MAPRE2Q15555 327 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 MMEL1Q495T6 779 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 ATAD3BQ5T9A4 648 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 OR5M10Q6IEU7 315 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 HMGN2P46Q86SG4 172 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 PACS2Q86VP3 889 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 WDSUB1Q8N9V3 476 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 TMEM41AQ96HV5 264 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 ZNF597Q96LX8 424 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 SLX1AQ9BQ83 275 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 SLC39A3Q9BRY0 314 aa11.65□□□□□ -0.54
SS18-202ENST00000269138 DEFB127Q9H1M4 99 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms